Herbiconiux salviae sp. nov., isolated from the flower of Salvia splendens

An aerobic, Gram-stain-positive and non-motile actinobacterial strain, designated SALV-R1<sup>T</sup>, was isolated from flower of <i>Salvia splendens</i> in Muan, Republic of Korea. Growth was observed at 10-30 °C (optimum, 28 °C) and pH 7.0-9.0 (optimum, pH 8.0) with up to 3% (w/v) NaCl (optimum, 1%). blast analysis of 16S rRNA gene sequences revealed the highest sequence similarity of strain SALV-R1<sup>T</sup> to <i>Herbiconiux oxytropis</i> CPCC 203406<sup>T</sup> (98.76%) followed by <i>Herbiconiux flava</i> VKM Ac-2058 (98.69%) and '<i>Herbiconiux gentiana</i>' CPCC 205716<sup>T</sup> (98.69%). According to the 16S rRNA gene-based phylogenetic tree, strain SALV-R1<sup>T</sup> formed a clade with <i>H. flava</i> NBRC 164003<sup>T</sup> and '<i>H. gentiana</i>' CPCC 205716<sup>T</sup>, which subsequently clustered with <i>H. oxytropis</i> CPCC 203406<sup>T</sup>. Strain SALV-R1<sup>T</sup> was closely related to <i>Herbiconiux moechotypicola</i> KCTC 19653<sup>T</sup> as well as <i>H. flava</i> NBRC 164003<sup>T</sup> and '<i>H. gentiana</i>' CPCC 205716<sup>T</sup> based on phylogenomic tree. OrthoANI and digital DNA-DNA hybridization values of strain SALV-R1<sup>T</sup> with the closely related strains were lower than 81.2 and 24.8%, respectively. The major respiratory menaquinones were MK-11 and MK-10. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol and glycolipid. The major fatty acids (>10%) of strain SALV-R1<sup>T</sup> were anteiso-C<sub>15:0</sub>, iso-C<sub>16:0</sub> and anteiso-C<sub>17:0</sub>. The cell wall peptidoglycan contained cross-linked l-diaminobutyric acid (type B2<i>γ</i>). The phenotypic, chemotaxonomic and genotypic data obtained in this study showed that strain SALV-R1<sup>T</sup> represents a novel species of the genus <i>Herbiconiux</i>, for which the name <i>Herbiconiux salviae</i> sp. nov. (type strain SALV-R1<sup>T</sup>=KACC 21604<sup>T</sup>=NBRC 116987<sup>T</sup>) is proposed.

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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Published
2026-01-22
DOI
https://doi.org/10.1099/ijsem.0.007046
Primary Topic
Genomics and Phylogenetic Studies
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article

Herbiconiux salviae sp. nov., isolated from the flower of Salvia splendens

Yiseul Kim, Moriyuki Hamada, Narumi Enomoto, Jun Heo et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Genomics and Phylogenetic Studies
article

Herbiconiux salviae sp. nov., isolated from the flower of Salvia splendens

Yiseul Kim, Moriyuki Hamada, Narumi Enomoto, Jun Heo, Seunghwan Kim, Hyorim Choi
article en

Abstract

An aerobic, Gram-stain-positive and non-motile actinobacterial strain, designated SALV-R1<sup>T</sup>, was isolated from flower of <i>Salvia splendens</i> in Muan, Republic of Korea. Growth was observed at 10-30 °C (optimum, 28 °C) and pH 7.0-9.0 (optimum, pH 8.0) with up to 3% (w/v) NaCl (optimum, 1%). blast analysis of 16S rRNA gene sequences revealed the highest sequence similarity of strain SALV-R1<sup>T</sup> to <i>Herbiconiux oxytropis</i> CPCC 203406<sup>T</sup> (98.76%) followed by <i>Herbiconiux flava</i> VKM Ac-2058 (98.69%) and '<i>Herbiconiux gentiana</i>' CPCC 205716<sup>T</sup> (98.69%). According to the 16S rRNA gene-based phylogenetic tree, strain SALV-R1<sup>T</sup> formed a clade with <i>H. flava</i> NBRC 164003<sup>T</sup> and '<i>H. gentiana</i>' CPCC 205716<sup>T</sup>, which subsequently clustered with <i>H. oxytropis</i> CPCC 203406<sup>T</sup>. Strain SALV-R1<sup>T</sup> was closely related to <i>Herbiconiux moechotypicola</i> KCTC 19653<sup>T</sup> as well as <i>H. flava</i> NBRC 164003<sup>T</sup> and '<i>H. gentiana</i>' CPCC 205716<sup>T</sup> based on phylogenomic tree. OrthoANI and digital DNA-DNA hybridization values of strain SALV-R1<sup>T</sup> with the closely related strains were lower than 81.2 and 24.8%, respectively. The major respiratory menaquinones were MK-11 and MK-10. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol and glycolipid. The major fatty acids (>10%) of strain SALV-R1<sup>T</sup> were anteiso-C<sub>15:0</sub>, iso-C<sub>16:0</sub> and anteiso-C<sub>17:0</sub>. The cell wall peptidoglycan contained cross-linked l-diaminobutyric acid (type B2<i>γ</i>). The phenotypic, chemotaxonomic and genotypic data obtained in this study showed that strain SALV-R1<sup>T</sup> represents a novel species of the genus <i>Herbiconiux</i>, for which the name <i>Herbiconiux salviae</i> sp. nov. (type strain SALV-R1<sup>T</sup>=KACC 21604<sup>T</sup>=NBRC 116987<sup>T</sup>) is proposed.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGYVol. 76(1)
National Institute of Technology and Evaluation (JP), Rural Development Administration (KR), Jeonbuk National University (KR)
Openalex Percentile: Top 82%
Genomics and Phylogenetic Studies
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