Radiomics predicts poorly differentiated hepatocellular carcinoma and uncovers ribosomal-immune dysregulation mechanism

Hepatocellular carcinoma (HCC) shows marked spatial heterogeneity, limiting biopsy-based Edmondson-Steiner (ES) grading. We developed a multicenter radiogenomic framework to noninvasively predict ES grade and explore underlying molecular mechanisms. Arterial-phase DCE-MRI from 295 patients and The Cancer Imaging Archive (TCIA) cases were analyzed using three tumor regions (body, edge, and out). An integrated volume-of-interest (VOI) random forest (RF) model was trained with selected features and externally validated. Radiogenomic analysis correlated radscore with TCIA transcriptomic profiles using weighted gene co-expression network analysis (WGCNA). The model achieved high discrimination (area under the curve [AUC] 0.959 internally; 0.860 externally). Radscore-associated modules revealed ribosomal dysregulation and immune exhaustion. A derived prognostic signature stratified and The Cancer Genome Atlas (TCGA) patients into distinct risk groups and independently predicted survival (hazard ratio [HR] 3.95, <i>p</i> < 0.0001; C index 0.643). This integrated radiogenomic approach enables noninvasive ES grading and provides insight into biologically relevant tumor heterogeneity.

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Journal
iScience
Published
2026-01-20
DOI
https://doi.org/10.1016/j.isci.2026.114699
Primary Topic
Radiomics and Machine Learning in Medical Imaging
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article
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article

Radiomics predicts poorly differentiated hepatocellular carcinoma and uncovers ribosomal-immune dysregulation mechanism

Hongfa Cai, Yuan Gao, Yonggang Li, Shuangqing Chen et al.
iScience
Radiomics and Machine Learning in Medical Imaging
article

Radiomics predicts poorly differentiated hepatocellular carcinoma and uncovers ribosomal-immune dysregulation mechanism

Hongfa Cai, Yuan Gao, Yonggang Li, Shuangqing Chen, Yan Zhu, Dong Liu, Ziwei Luo, Zhiqian Lou, Yifan Miao
article en

Abstract

Hepatocellular carcinoma (HCC) shows marked spatial heterogeneity, limiting biopsy-based Edmondson-Steiner (ES) grading. We developed a multicenter radiogenomic framework to noninvasively predict ES grade and explore underlying molecular mechanisms. Arterial-phase DCE-MRI from 295 patients and The Cancer Imaging Archive (TCIA) cases were analyzed using three tumor regions (body, edge, and out). An integrated volume-of-interest (VOI) random forest (RF) model was trained with selected features and externally validated. Radiogenomic analysis correlated radscore with TCIA transcriptomic profiles using weighted gene co-expression network analysis (WGCNA). The model achieved high discrimination (area under the curve [AUC] 0.959 internally; 0.860 externally). Radscore-associated modules revealed ribosomal dysregulation and immune exhaustion. A derived prognostic signature stratified and The Cancer Genome Atlas (TCGA) patients into distinct risk groups and independently predicted survival (hazard ratio [HR] 3.95, <i>p</i> < 0.0001; C index 0.643). This integrated radiogenomic approach enables noninvasive ES grading and provides insight into biologically relevant tumor heterogeneity.

iScienceVol. 29(2)
Second Military Medical University (CN), Soochow University (CN), Changhai Hospital (CN), Suzhou Municipal Hospital (CN), First Affiliated Hospital of Soochow University (CN)
Openalex Percentile: Top 84%
Radiomics and Machine Learning in Medical Imaging
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Radiomics predicts poorly differentiated hepatocellular carcinoma and uncovers ribosomal-immune dysregulation mechanism — Hongfa Cai, Yuan Gao, et al. · iScience (2026) | TGRS Research Map | TGRS