Influence of Ni-related enzymes on the Ni cycle in the Southern Ocean: insights from isotopes and metagenomics

Abstract. Nickel (Ni) is an essential micronutrient for marine microorganisms, being involved in enzymes controlling the nitrogen cycle and metabolic responses to oxidative stress. In this study, we examine the covariation between the abundance of Ni-related enzymes and Ni isotope fractionation. To do so, dissolved Ni concentrations and isotope compositions are presented together with metagenomics on samples from the Antarctic Circumnavigation Expedition. Overall, results reveal lower Ni concentrations and higher δ60Ni values in surface waters north of the Sub-Antarctic Front compared to southerly stations. One exception is seen near the high-latitude Mertz Glacier, where the systematics between Ni and δ60Ni better resemble those of low-latitude stations. Relative abundances of urease and Ni-SOD in metagenomes are found to correlate with δ60Ni, potentially suggesting preferential biological uptake of Ni by the organisms using these enzymes. We find a particularly high abundance of urease in diatoms and alphaproteobacteria near the Mertz Glacier, matching the surprisingly high δ60Ni. We thus hypothesise that urea could serve as a nitrogen source for microbial organisms in the late stage of polynya diatom blooms, perhaps causing the observed Ni drawdown and isotope fractionation. This study represents an initial exploration of the influence of biological processes on Ni and δ60Ni distributions. It constitutes a first step towards the further analyses (e.g., culture experiments and metatranscriptomics) needed to determine which exact processes lead to the δ60Ni biogeochemical divide observed between low-latitude and high-latitude waters.

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Published
2026-01-19
DOI
https://doi.org/10.5194/egusphere-2025-6336
Primary Topic
Marine and coastal ecosystems
Type
article
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article

Influence of Ni-related enzymes on the Ni cycle in the Southern Ocean: insights from isotopes and metagenomics

Ricardo A. Zamora, Michael J. Ellwood, Nicolas Cassar, Emile Faure et al.
Marine and coastal ecosystems
article

Influence of Ni-related enzymes on the Ni cycle in the Southern Ocean: insights from isotopes and metagenomics

Ricardo A. Zamora, Michael J. Ellwood, Nicolas Cassar, Emile Faure, Matthias Sieber, Loïs Maignien, Christel Hässler, Yajuan Lin, Corey Archer, Derek Vance, Nolwenn Lemaitre
article en

Abstract

Abstract. Nickel (Ni) is an essential micronutrient for marine microorganisms, being involved in enzymes controlling the nitrogen cycle and metabolic responses to oxidative stress. In this study, we examine the covariation between the abundance of Ni-related enzymes and Ni isotope fractionation. To do so, dissolved Ni concentrations and isotope compositions are presented together with metagenomics on samples from the Antarctic Circumnavigation Expedition. Overall, results reveal lower Ni concentrations and higher δ60Ni values in surface waters north of the Sub-Antarctic Front compared to southerly stations. One exception is seen near the high-latitude Mertz Glacier, where the systematics between Ni and δ60Ni better resemble those of low-latitude stations. Relative abundances of urease and Ni-SOD in metagenomes are found to correlate with δ60Ni, potentially suggesting preferential biological uptake of Ni by the organisms using these enzymes. We find a particularly high abundance of urease in diatoms and alphaproteobacteria near the Mertz Glacier, matching the surprisingly high δ60Ni. We thus hypothesise that urea could serve as a nitrogen source for microbial organisms in the late stage of polynya diatom blooms, perhaps causing the observed Ni drawdown and isotope fractionation. This study represents an initial exploration of the influence of biological processes on Ni and δ60Ni distributions. It constitutes a first step towards the further analyses (e.g., culture experiments and metatranscriptomics) needed to determine which exact processes lead to the δ60Ni biogeochemical divide observed between low-latitude and high-latitude waters.

Australian National University (AU), Centre National de la Recherche Scientifique (FR), Marine Biological Laboratory (US), Ifremer (FR), Université de Bretagne Occidentale (FR), Duke University (US), Université Fédérale de Toulouse Midi-Pyrénées (FR), Station Biologique de Roscoff (FR), ETH Zurich (CH), Sorbonne Université (FR), Centre de Recherche sur l'Environnement Alpin (CH), Institut de Recherche pour le Développement (FR), École Polytechnique Fédérale de Lausanne (CH), University of South Florida St. Petersburg (US), Texas A&M University – Corpus Christi (US), University of Lausanne (CH)
National Science Foundation, European Commission, Agence Nationale de la Recherche, École Polytechnique Fédérale de Lausanne, Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung, Eidgenössische Technische Hochschule Zürich, Swiss Polar Institute
Life below water
Openalex Percentile: Top 86%
Marine and coastal ecosystems
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