Reconstruction of a Malignant Cellular Attractor from Public Genomic and Nuclear Constraint Statistics

This study presents a non-interventional computational framework for reconstructing malignant cellular organization as a stable attractor in an abstract constraint-based state space. Using aggregated statistical summaries from publicly available cancer datasets—including gene expression, epigenetic topology, chromatin contact structure, nuclear morphology, mutation landscapes, and signaling pathway statistics—we infer a high-level representation of the malignant nuclear state without invoking procedural biology or therapeutic modeling. The analysis demonstrates consistent convergence to a reproducible attractor characterized by zero topology variance and stable global metrics across independent simulation runs. Exploration of adjacent regions in state space reveals lower-stability basins, supporting the interpretation of malignancy as one among multiple possible organizational regimes rather than a singular mechanistic outcome. By operating exclusively on public summary data and enforcing physical, causal, and informational constraints, this work provides a rigorously defined, hypothesis-generating model of malignant organization. The framework offers a systems-level perspective on cancer that complements reductionist approaches while avoiding clinically actionable claims.

Authors

Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2026-01-19
DOI
https://doi.org/10.5281/zenodo.18297387
Primary Topic
Mathematical Biology Tumor Growth
Type
article
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article

Reconstruction of a Malignant Cellular Attractor from Public Genomic and Nuclear Constraint Statistics

Lumenis IO PTY LTD
Zenodo (CERN European Organization for Nuclear Research)
Mathematical Biology Tumor Growth
article

Reconstruction of a Malignant Cellular Attractor from Public Genomic and Nuclear Constraint Statistics

Lumenis IO PTY LTD
article en

Abstract

This study presents a non-interventional computational framework for reconstructing malignant cellular organization as a stable attractor in an abstract constraint-based state space. Using aggregated statistical summaries from publicly available cancer datasets—including gene expression, epigenetic topology, chromatin contact structure, nuclear morphology, mutation landscapes, and signaling pathway statistics—we infer a high-level representation of the malignant nuclear state without invoking procedural biology or therapeutic modeling. The analysis demonstrates consistent convergence to a reproducible attractor characterized by zero topology variance and stable global metrics across independent simulation runs. Exploration of adjacent regions in state space reveals lower-stability basins, supporting the interpretation of malignancy as one among multiple possible organizational regimes rather than a singular mechanistic outcome. By operating exclusively on public summary data and enforcing physical, causal, and informational constraints, this work provides a rigorously defined, hypothesis-generating model of malignant organization. The framework offers a systems-level perspective on cancer that complements reductionist approaches while avoiding clinically actionable claims.

Zenodo (CERN European Organization for Nuclear Research)
Openalex Percentile: Top 85%
Mathematical Biology Tumor Growth
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Reconstruction of a Malignant Cellular Attractor from Public Genomic and Nuclear Constraint Statistics — Lumenis IO PTY LTD · Zenodo (CERN European Organization for Nuclear Research) (2026) | TGRS Research Map | TGRS