Compact deep learning models for colon histopathology focusing performance and generalization challenges

Colorectal cancer is a leading cause of cancer-related mortality, and accurate analysis of histopathological images is critical for early diagnosis and improved patient outcomes. This study proposes and systematically evaluates four purpose-built lightweight convolutional neural network (CNN) variants (Lite-V0, Lite-V1, Lite-V2, and Lite-V4) for binary classification of colon histopathology images into Colon_Adenocarcinoma and Colon_Benign_Tissue. Experiments were conducted on a balanced dataset (24,000 images) with fixed train/validation/test splits and comprehensive evaluation using accuracy and macro-F1, supported by confusion matrices and ROC/precision–recall analyses. Among all variants, Lite-V2 achieved the best validation performance (macro-F1 $$\approx$$ 0.999), while remaining highly compact (1.53 MB; 127,682 parameters), indicating a favorable accuracy–efficiency trade-off for deployment-oriented diagnostic support. On the independent test set, however, Lite-V2 exhibited a marked generalization drop, achieving approximately 50% accuracy and macro-F1 = 0.33, suggesting a domain-shift effect between validation and test samples. These findings demonstrate that lightweight CNNs can achieve near-perfect internal validation performance for colon histopathology classification, but robust cross-domain generalization remains essential; future work will focus on domain adaptation and stain-robust training strategies to improve reliability on unseen clinical data.

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Publication Details

Journal
Scientific Reports
Published
2026-01-19
DOI
https://doi.org/10.1038/s41598-026-35119-y
Primary Topic
AI in cancer detection
Type
article
Field-Weighted Citation Impact
0.00

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article

Compact deep learning models for colon histopathology focusing performance and generalization challenges

Fareeha Hanif, Heba Abdelgader Mohammed, Ali Raza
Scientific Reports
AI in cancer detection
article

Compact deep learning models for colon histopathology focusing performance and generalization challenges

Fareeha Hanif, Heba Abdelgader Mohammed, Ali Raza
article en

Abstract

Colorectal cancer is a leading cause of cancer-related mortality, and accurate analysis of histopathological images is critical for early diagnosis and improved patient outcomes. This study proposes and systematically evaluates four purpose-built lightweight convolutional neural network (CNN) variants (Lite-V0, Lite-V1, Lite-V2, and Lite-V4) for binary classification of colon histopathology images into Colon_Adenocarcinoma and Colon_Benign_Tissue. Experiments were conducted on a balanced dataset (24,000 images) with fixed train/validation/test splits and comprehensive evaluation using accuracy and macro-F1, supported by confusion matrices and ROC/precision–recall analyses. Among all variants, Lite-V2 achieved the best validation performance (macro-F1 $$\approx$$ 0.999), while remaining highly compact (1.53 MB; 127,682 parameters), indicating a favorable accuracy–efficiency trade-off for deployment-oriented diagnostic support. On the independent test set, however, Lite-V2 exhibited a marked generalization drop, achieving approximately 50% accuracy and macro-F1 = 0.33, suggesting a domain-shift effect between validation and test samples. These findings demonstrate that lightweight CNNs can achieve near-perfect internal validation performance for colon histopathology classification, but robust cross-domain generalization remains essential; future work will focus on domain adaptation and stain-robust training strategies to improve reliability on unseen clinical data.

Scientific ReportsVol. 16(1)
University of the Punjab (PK), University of Education (PK), King Khalid University (SA)
King Khalid University
Good health and well-being
Openalex Percentile: Top 84%
AI in cancer detection
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