Symmetry-Preserving Diffusion Models via Target Symmetrization

Diffusion models are powerful tools for capturing complex distributions, but modeling data with inherent symmetries, such as molecular structures, remains challenging. Equivariant denoisers are commonly used to address this, but they introduce architectural complexity and optimization challenges, including noisy gradients and convergence issues. We propose a novel approach that enforces equivariance through a symmetrized loss function, which applies a time-dependent weighted averaging operation over group actions to the model's prediction target. This ensures equivariance without explicit architectural constraints and reduces gradient variance, leading to more stable and efficient optimization. Our method uses Monte Carlo sampling to estimate the average, incurring minimal computational overhead. We provide theoretical guarantees of equivariance for the minimizer of our loss function and demonstrate its effectiveness on synthetic datasets and the molecular conformation generation task using the GEOM-QM9 dataset. Experiments show improved sample quality compared to existing methods, highlighting the potential of our approach to enhance the scalability and practicality of equivariant diffusion models in generative tasks.

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Publication Details

Journal
Open Access CRIS of the University of Bern
Published
2025-03-06
DOI
https://doi.org/10.48620/93958
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
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article

Symmetry-Preserving Diffusion Models via Target Symmetrization

Guy Van den Broeck, Mathias Niepert, Yun K. Ye, Anji Liu et al.
Open Access CRIS of the University of Bern
Machine Learning in Materials Science
article

Symmetry-Preserving Diffusion Models via Target Symmetrization

Guy Van den Broeck, Mathias Niepert, Yun K. Ye, Anji Liu, Trung-Dung Hoang, Vinh Tong
article en

Abstract

Diffusion models are powerful tools for capturing complex distributions, but modeling data with inherent symmetries, such as molecular structures, remains challenging. Equivariant denoisers are commonly used to address this, but they introduce architectural complexity and optimization challenges, including noisy gradients and convergence issues. We propose a novel approach that enforces equivariance through a symmetrized loss function, which applies a time-dependent weighted averaging operation over group actions to the model's prediction target. This ensures equivariance without explicit architectural constraints and reduces gradient variance, leading to more stable and efficient optimization. Our method uses Monte Carlo sampling to estimate the average, incurring minimal computational overhead. We provide theoretical guarantees of equivariance for the minimizer of our loss function and demonstrate its effectiveness on synthetic datasets and the molecular conformation generation task using the GEOM-QM9 dataset. Experiments show improved sample quality compared to existing methods, highlighting the potential of our approach to enhance the scalability and practicality of equivariant diffusion models in generative tasks.

Open Access CRIS of the University of Bern
Diabetes Australia (AU)
Openalex Percentile: Top 46%
Machine Learning in Materials Science
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Symmetry-Preserving Diffusion Models via Target Symmetrization — Guy Van den Broeck, Mathias Niepert, et al. · Open Access CRIS of the University of Bern (2025) | TGRS Research Map | TGRS