Segmentation of Image Observations for Articulated Endoscope Control

Abstract We present a method to reduce the sim-to-real gap for down-stream reinforcement-learning approaches that are trained in simulation. Our pipeline converts endoscopic videos into simplified segmentation masks without any model retraining. Using the zero-shot capability of the Segment Anything Model (SAM), a lightweight HSV filter and SORT tracking, our method produces consistent semantic masks for a pickand- place task with an articulated endoscope. We quantitatively show the importance of each of these components. Unlike typical sim-to-real approaches that render synthetic data more realistic, we make real footage "look synthetic". Experiments on a physical setup demonstrate promising segmentation masks even under partial occlusion, motion blur and lighting variations.

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Publication Details

Journal
Current Directions in Biomedical Engineering
Published
2025-12-01
DOI
https://doi.org/10.1515/cdbme-2025-0310
Primary Topic
Advanced Vision and Imaging
Type
article
Field-Weighted Citation Impact
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article

Segmentation of Image Observations for Articulated Endoscope Control

Franziska Mathis-Ullrich, Georg Rauter, Pit Henrich, Paul Maria Scheikl et al.
Current Directions in Biomedical Engineering
Advanced Vision and Imaging
article

Segmentation of Image Observations for Articulated Endoscope Control

Franziska Mathis-Ullrich, Georg Rauter, Pit Henrich, Paul Maria Scheikl, Pooja Rao
article en

Abstract

Abstract We present a method to reduce the sim-to-real gap for down-stream reinforcement-learning approaches that are trained in simulation. Our pipeline converts endoscopic videos into simplified segmentation masks without any model retraining. Using the zero-shot capability of the Segment Anything Model (SAM), a lightweight HSV filter and SORT tracking, our method produces consistent semantic masks for a pickand- place task with an articulated endoscope. We quantitatively show the importance of each of these components. Unlike typical sim-to-real approaches that render synthetic data more realistic, we make real footage "look synthetic". Experiments on a physical setup demonstrate promising segmentation masks even under partial occlusion, motion blur and lighting variations.

Current Directions in Biomedical EngineeringVol. 11(2)
Friedrich-Alexander-Universität Erlangen-Nürnberg (DE), University of Basel (CH)
Openalex Percentile: Top 32%
Advanced Vision and Imaging
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Segmentation of Image Observations for Articulated Endoscope Control — Franziska Mathis-Ullrich, Georg Rauter, et al. · Current Directions in Biomedical Engineering (2025) | TGRS Research Map | TGRS