Personalized Antibiogram: A Novel Multitask Machine Learning Framework for Simultaneous Prediction of Antimicrobial Resistance Profile With Enhanced Detection of Carbapenem Resistance in Enterobacteriaceae

A multi-task XGBoost framework can accurately predict individualized resistance profiles for common Gram-negative pathogens, outperforming conventional antibiograms and single-target models. Personalized antibiograms may enhance the selection of empiric therapy, including the detection of carbapenem resistance in low-endemicity settings.

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Publication Details

Journal
Clinical Infectious Diseases
Published
2026-01-14
DOI
https://doi.org/10.1093/cid/ciag027
Primary Topic
Antibiotic Use and Resistance
Type
article
Field-Weighted Citation Impact
0.00
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article

Personalized Antibiogram: A Novel Multitask Machine Learning Framework for Simultaneous Prediction of Antimicrobial Resistance Profile With Enhanced Detection of Carbapenem Resistance in Enterobacteriaceae

David Manuel Hernández, Yaohua Wang, Michihiko Goto, Eli N Perencevich et al.
Clinical Infectious Diseases
Antibiotic Use and Resistance
article

Personalized Antibiogram: A Novel Multitask Machine Learning Framework for Simultaneous Prediction of Antimicrobial Resistance Profile With Enhanced Detection of Carbapenem Resistance in Enterobacteriaceae

David Manuel Hernández, Yaohua Wang, Michihiko Goto, Eli N Perencevich, W Nick Street, Qianyi Shi
article en

Abstract

A multi-task XGBoost framework can accurately predict individualized resistance profiles for common Gram-negative pathogens, outperforming conventional antibiograms and single-target models. Personalized antibiograms may enhance the selection of empiric therapy, including the detection of carbapenem resistance in low-endemicity settings.

Clinical Infectious Diseases
University of Iowa (US), Iowa City VA Health Care System (US)
Openalex Percentile: Top 78%
Antibiotic Use and Resistance
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