Prompting and Fine-Tuning Large Language Models for Parkinson Disease Diagnosis: Comparative Evaluation Study Using the PPMI Structured Dataset

This study provides an exploratory benchmark of how modern LLMs process structured clinical variables in natural language form. While several models achieved diagnostic performance comparable to LR across both the test and temporal validation datasets, their outputs were sensitive to prompting formats, model choice, and class distributions. Occasional variability across repeated output generations reflected the stochastic nature of LLMs, and lightweight models required supervised fine-tuning for stable generalization. These findings highlight the capabilities and limitations of current LLMs in handling tabular clinical information and underscore the need for cautious application and further investigation.

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Publication Details

Journal
JMIR Medical Informatics
Published
2026-01-15
DOI
https://doi.org/10.2196/77561
Primary Topic
Voice and Speech Disorders
Type
article
Field-Weighted Citation Impact
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article

Prompting and Fine-Tuning Large Language Models for Parkinson Disease Diagnosis: Comparative Evaluation Study Using the PPMI Structured Dataset

So Yun Jun, Young Jin Jeong, Do-Young Kang, Hyun-Ji Shin
JMIR Medical Informatics
Voice and Speech Disorders
article

Prompting and Fine-Tuning Large Language Models for Parkinson Disease Diagnosis: Comparative Evaluation Study Using the PPMI Structured Dataset

So Yun Jun, Young Jin Jeong, Do-Young Kang, Hyun-Ji Shin
article en

Abstract

This study provides an exploratory benchmark of how modern LLMs process structured clinical variables in natural language form. While several models achieved diagnostic performance comparable to LR across both the test and temporal validation datasets, their outputs were sensitive to prompting formats, model choice, and class distributions. Occasional variability across repeated output generations reflected the stochastic nature of LLMs, and lightweight models required supervised fine-tuning for stable generalization. These findings highlight the capabilities and limitations of current LLMs in handling tabular clinical information and underscore the need for cautious application and further investigation.

JMIR Medical InformaticsVol. 14
Dong-A University Hospital (KR), Dong-A University (KR)
Openalex Percentile: Top 87%
Voice and Speech Disorders
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