A critical role of heterotrophic bacteria in early diagenesis of carbonates through exopolymer degradation and calcium release

Abstract The degradation of exopolymeric substances (EPS) by heterotrophic bacteria, concomitant release of calcium ions and precipitation of carbonates were studied in a temperate mountain lake, Lac d'Ilay, Jura France. Phytoplankton blooms in this lake produced large amounts of exopolymeric substances (EPS; 1.8–3.0 mg L −1 ), probably inhibiting CaCO 3 precipitation by binding Ca 2+ as shown by the saturation index of calcite and aragonite remaining well below 1. EPS settled to the sediments, where additional polymeric substances were produced by the benthic community. The total amount of EPS decreased downcore from ca 50 μg/g dry sediment near the surface to ca 1.5 μg/g dry sediment at the bottom (120 cm depth). A decrease in acidity, protein and sugar content, and calcium‐binding capacity of EPS with depth coincided with active calcite precipitation. Aerobic and anaerobic EPS‐degrading heterotrophic enrichments were obtained from the top, middle and bottom of the core. Doubling times of aerobic cultures from the top were six times shorter than those of cultures obtained from the bottom of the core, but anaerobic growth rates were similar across all enrichments. Aerobic turnover rates of organic compounds decreased by a factor of 4–5 from top to bottom; anaerobic rates were similar at all depths, except for the turnover of polymers, which was negligible at the surface compared to rates at the middle and bottom. All enrichments released calcium when grown on EPS. Growth on calcium‐saturated EPS in anaerobic cultures obtained from the bottom of the core was the slowest, but still released 26% of the Ca in 20 days. This release during EPS degradation explained an increase in free calcium ions with depth reported in a previous study and may account for a large fraction of the carbonate mud. This suggests that sediments should be considered as an important source of biogenic carbonates.