Preliminary screening of rhizosphere bacteria in shallot plants grown in organic field as antagonists against

Fusarium wilt disease, caused by Fusarium oxysporum f. sp. cepae (Focc), is a devastating disease affecting shallot plants. This study aimed to screen rhizosphere bacteria isolated from healthy shallot plants cultivated in organic field and to evaluate their antagonistic potential against Focc. A total of 29 rhizosphere bacterial isolates were found from healthy shallot plants in Jember, East Java, Indonesia. These isolates exhibited considerable variation in morphological characteristics, including colony color, shape, and opacity. The bacterial density in the samples generally ranged from 107 to 109 CFU/ml, with colony numbers differing among isolates. The predominant colony colors were white and yellow, with morphological forms ranging from circular to irregular and serrated. Among these, thirteen isolates (RB1, RG1, RH1, RI1, RJ1, RF2, RA3, RB3, GC3, GD3, GRA4, GRC4, and GRE4) demonstrated strong antagonistic potential against Focc, with inhibition percentages ranging from 56.60 to 68.79%. These findings indicate that rhizosphere bacteria from shallot plants possess antagonistic properties and hold potential as biocontrol candidates against Fusarium wilt. However, further in vitro antagonistic assays and molecular identification are required to confirm the bacterial species involved and to determine their efficacy in suppressing Fusarium wilt while promoting shallot growth.

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Publication Details

Journal
Springer Link (Chiba Institute of Technology)
Published
2026-01-15
DOI
https://doi.org/10.1051/bioconf/202621002018/pdf
Primary Topic
Plant-Microbe Interactions and Immunity
Type
article
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article

Preliminary screening of rhizosphere bacteria in shallot plants grown in organic field as antagonists against

Devina Cinantya Anindita, Ferril Muhammad Nur, Suwinda Fibriani, Christa Dyah Utami et al.
Springer Link (Chiba Institute of Technology)
Plant-Microbe Interactions and Immunity
article

Preliminary screening of rhizosphere bacteria in shallot plants grown in organic field as antagonists against

Devina Cinantya Anindita, Ferril Muhammad Nur, Suwinda Fibriani, Christa Dyah Utami, Gallyndra Fatkhu Dinata
article en

Abstract

Fusarium wilt disease, caused by Fusarium oxysporum f. sp. cepae (Focc), is a devastating disease affecting shallot plants. This study aimed to screen rhizosphere bacteria isolated from healthy shallot plants cultivated in organic field and to evaluate their antagonistic potential against Focc. A total of 29 rhizosphere bacterial isolates were found from healthy shallot plants in Jember, East Java, Indonesia. These isolates exhibited considerable variation in morphological characteristics, including colony color, shape, and opacity. The bacterial density in the samples generally ranged from 107 to 109 CFU/ml, with colony numbers differing among isolates. The predominant colony colors were white and yellow, with morphological forms ranging from circular to irregular and serrated. Among these, thirteen isolates (RB1, RG1, RH1, RI1, RJ1, RF2, RA3, RB3, GC3, GD3, GRA4, GRC4, and GRE4) demonstrated strong antagonistic potential against Focc, with inhibition percentages ranging from 56.60 to 68.79%. These findings indicate that rhizosphere bacteria from shallot plants possess antagonistic properties and hold potential as biocontrol candidates against Fusarium wilt. However, further in vitro antagonistic assays and molecular identification are required to confirm the bacterial species involved and to determine their efficacy in suppressing Fusarium wilt while promoting shallot growth.

Springer Link (Chiba Institute of Technology)
Openalex Percentile: Top 86%
Plant-Microbe Interactions and Immunity
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Preliminary screening of rhizosphere bacteria in shallot plants grown in organic field as antagonists against — Devina Cinantya Anindita, Ferril Muhammad Nur, et al. · Springer Link (Chiba Institute of Technology) (2026) | TGRS Research Map | TGRS