<scp>pH</scp> ‐Dependent Degradation of Macrobial Environmental <scp>DNA</scp> in Water

Environmental DNA (eDNA) analysis has increasingly been used for aquatic biomonitoring, although interpretation of results needs to consider how environmental factors influence the degradation process of eDNA. This review focuses on pH, which has long been considered a key factor in eDNA degradation although its apparent effect on eDNA degradation has varied across studies. Here I present a synthesis of existing research that summarises what is so far known about the pH dependence of eDNA degradation, and a meta-analysis that demonstrates a nonlinear, upward convex relationship between eDNA decay rates and pH, with modelled eDNA decay rates peaking around pH 8. These results suggest that under slightly alkaline conditions, which are often considered suitable for DNA preservation, eDNA degradation may be accelerated by the promotion of microbial and enzymatic activity. On the other hand, there were substantial inter-study discrepancies in the dataset, suggesting that the present meta-analysis could not fully address the complexity of pH-dependent eDNA degradation. I end this review with an extensive discussion of some possible mechanisms that should be further investigated in order to achieve a more comprehensive understanding of the pH dependence of eDNA degradation. These efforts will help with more accurate predictions of the persistence time and decay rates of eDNA under various environmental conditions, thereby potentially improving our interpretations of eDNA-based biodiversity surveys.

Authors

Institutions

Publication Details

Journal
Molecular Ecology Resources
Published
2026-01-16
DOI
https://doi.org/10.1111/1755-0998.70101
Primary Topic
Environmental DNA in Biodiversity Studies
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

pH ‐Dependent Degradation of Macrobial Environmental DNA in Water

Toshiaki Jo
Molecular Ecology Resources
Environmental DNA in Biodiversity Studies
article

pH ‐Dependent Degradation of Macrobial Environmental DNA in Water

Toshiaki Jo
article en

Abstract

Environmental DNA (eDNA) analysis has increasingly been used for aquatic biomonitoring, although interpretation of results needs to consider how environmental factors influence the degradation process of eDNA. This review focuses on pH, which has long been considered a key factor in eDNA degradation although its apparent effect on eDNA degradation has varied across studies. Here I present a synthesis of existing research that summarises what is so far known about the pH dependence of eDNA degradation, and a meta-analysis that demonstrates a nonlinear, upward convex relationship between eDNA decay rates and pH, with modelled eDNA decay rates peaking around pH 8. These results suggest that under slightly alkaline conditions, which are often considered suitable for DNA preservation, eDNA degradation may be accelerated by the promotion of microbial and enzymatic activity. On the other hand, there were substantial inter-study discrepancies in the dataset, suggesting that the present meta-analysis could not fully address the complexity of pH-dependent eDNA degradation. I end this review with an extensive discussion of some possible mechanisms that should be further investigated in order to achieve a more comprehensive understanding of the pH dependence of eDNA degradation. These efforts will help with more accurate predictions of the persistence time and decay rates of eDNA under various environmental conditions, thereby potentially improving our interpretations of eDNA-based biodiversity surveys.

Molecular Ecology ResourcesVol. 26(2)
Japan Society for the Promotion of Science (JP), Kyoto University (JP), Kyoto College of Graduate Studies for Informatics (JP)
Japan Society for the Promotion of Science
Life in Land
Openalex Percentile: Top 88%
Environmental DNA in Biodiversity Studies
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

<scp>pH</scp> ‐Dependent Degradation of Macrobial Environmental <scp>DNA</scp> in Water — Toshiaki Jo · Molecular Ecology Resources (2026) | TGRS Research Map | TGRS