The chromosomal genome sequence of the Black Lichen, Lichina pygmaea (Lightf.) C.Agardh (Lichinales: Lichinaceae) and its associated microbial metagenome sequences

<ns3:p> We present a haploid genome assembly from an individual <ns3:italic>Lichina pygmaea</ns3:italic> (Black Lichen; Ascomycota; Lichinomycetes; Lichinales; Lichinaceae). The genome sequence has a total length of 32.42 megabases. The assembly is scaffolded into 7 chromosomal pseudomolecules. The mitochondrial genome has also been assembled, with a length of 47.95 kilobases. Gene annotation of this assembly on Ensembl identified 8 665 protein-coding genes. From the metagenome data, we recovered 9 bins, of which 4 were high-quality MAGs. </ns3:p>

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Publication Details

Journal
Wellcome Open Research
Published
2026-01-16
DOI
https://doi.org/10.12688/wellcomeopenres.25380.1
Primary Topic
Lichen and fungal ecology
Type
article
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article

The chromosomal genome sequence of the Black Lichen, Lichina pygmaea (Lightf.) C.Agardh (Lichinales: Lichinaceae) and its associated microbial metagenome sequences

Nathan Chrismas, Joanna Harley, Michael Cunliffe, Patrick Adkins et al.
Wellcome Open Research
Lichen and fungal ecology
article

The chromosomal genome sequence of the Black Lichen, Lichina pygmaea (Lightf.) C.Agardh (Lichinales: Lichinaceae) and its associated microbial metagenome sequences

Nathan Chrismas, Joanna Harley, Michael Cunliffe, Patrick Adkins, Tree of Life Core Informatics collective
article en

Abstract

<ns3:p> We present a haploid genome assembly from an individual <ns3:italic>Lichina pygmaea</ns3:italic> (Black Lichen; Ascomycota; Lichinomycetes; Lichinales; Lichinaceae). The genome sequence has a total length of 32.42 megabases. The assembly is scaffolded into 7 chromosomal pseudomolecules. The mitochondrial genome has also been assembled, with a length of 47.95 kilobases. Gene annotation of this assembly on Ensembl identified 8 665 protein-coding genes. From the metagenome data, we recovered 9 bins, of which 4 were high-quality MAGs. </ns3:p>

Wellcome Open ResearchVol. 11
Life in Land
Openalex Percentile: Top 91%
Lichen and fungal ecology
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