Atomic Charges via Gradient Boosting: Development and Application for Solvation Energies in Organic Solvents

A gradient-boosting based atomic-charge scheme, BoostCha, is introduced. The BoostCha model operates in three steps: it first predicts pseudo-charges for individual atoms based on their local environments, represented by three-dimensional descriptors of Kocer-Mason-Erturk type, then refines these values using global molecular information, and finally restores the charge conservation. The BoostCha charges are employed as input features in two independent machine-learning models for predicting solvation free energies in organic solvents: ESE-Boost, a gradient-boosting model, and ESE-ANN, a dense artificial neural network. Both approaches yield strong predictive performance, with average root-mean-square errors of 0.49 and 0.52 kcal/mol, respectively. The methods demonstrate consistent performance across diverse solvent classes and are particularly accurate for alkanes, alcohols, ethers, esters, ketones, and aromatic and haloaromatic solvents.

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Publication Details

Journal
Journal of Computational Chemistry
Published
2026-01-15
DOI
https://doi.org/10.1002/jcc.70310
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
0.00

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article

Atomic Charges via Gradient Boosting: Development and Application for Solvation Energies in Organic Solvents

Sergei F. Vyboishchikov
Journal of Computational Chemistry
Machine Learning in Materials Science
article

Atomic Charges via Gradient Boosting: Development and Application for Solvation Energies in Organic Solvents

Sergei F. Vyboishchikov
article en

Abstract

A gradient-boosting based atomic-charge scheme, BoostCha, is introduced. The BoostCha model operates in three steps: it first predicts pseudo-charges for individual atoms based on their local environments, represented by three-dimensional descriptors of Kocer-Mason-Erturk type, then refines these values using global molecular information, and finally restores the charge conservation. The BoostCha charges are employed as input features in two independent machine-learning models for predicting solvation free energies in organic solvents: ESE-Boost, a gradient-boosting model, and ESE-ANN, a dense artificial neural network. Both approaches yield strong predictive performance, with average root-mean-square errors of 0.49 and 0.52 kcal/mol, respectively. The methods demonstrate consistent performance across diverse solvent classes and are particularly accurate for alkanes, alcohols, ethers, esters, ketones, and aromatic and haloaromatic solvents.

Journal of Computational ChemistryVol. 47(2)
Universitat de Girona (ES)
Ministerio de Ciencia, Innovación y Universidades
Life in Land
Openalex Percentile: Top 87%
Machine Learning in Materials Science
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Atomic Charges via Gradient Boosting: Development and Application for Solvation Energies in Organic Solvents — Sergei F. Vyboishchikov · Journal of Computational Chemistry (2026) | TGRS Research Map | TGRS