Predicting upwelling dynamics in the South Sea of Java, Indonesia: A deep learning approach with ConvLSTM and 3D-CNN

Oceans exhibit complex dynamics influenced by climate change, anthropogenic activities, and natural phenomena. Understanding these dynamics is critical for ensuring the sustainability of marine environments and their optimal utilization. This research aims to study and monitor upwelling phenomena in the South Sea of Java. Upwelling, the exchange of nutrient-rich, cold water from deeper layers to the surface, enhances marine biological productivity; Sea Surface Temperature (SST) serves as a key indicator for its detection. To achieve these objectives, this study employs both ConvLSTM and 3D-CNN. ConvLSTM, a deep learning architecture that integrates convolutional structures within LSTM units, effectively captures spatiotemporal dependencies in sequential data. 3D-CNN, a deep learning model extending traditional 2D convolutional neural networks, processes volumetric data, enabling the extraction of spatial features across three dimensions. Analysis reveals that ConvLSTM outperforms 3D-CNN in modeling upwelling data in the South Sea of Java. This is evidenced by lower Root Mean Square Error (RMSE) and Mean Absolute Error (MAE). The ConvLSTM method was then used for forecasting, and the results were validated with data obtained from local fishermen regarding their fishing expeditions. Visual analysis confirms that the ConvLSTM method accurately models upwelling data in the South Sea of Java with fishermen's schedules. ConvLSTM and 3D-CNN methods were comparatively evaluated for modeling Sea Surface Temperature (SST) data, considering wind speed, sea surface salinity, and the El Niño-Southern Oscillation (ENSO) phase as influential factors. Based on Root Mean Square Error (RMSE) and Mean Absolute Error (MAE) values, the ConvLSTM method exhibited lower values, indicating superior performance compared to the 3D-CNN approach. Specifically, RMSE and MAE values for ConvLSTM were 0.4161 and 0.3017, respectively, while for 3D-CNN, the corresponding values were 0.6095 and 0.4259. Upwelling data forecasting results were validated against local fishermen's schedules, with data collected in July 2022. Visual inspection confirmed alignment between the forecasted upwelling patterns and the fishermen's activity.

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Journal
MethodsX
Published
2026-01-15
DOI
https://doi.org/10.1016/j.mex.2026.103802
Primary Topic
Oceanographic and Atmospheric Processes
Type
article
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article

Predicting upwelling dynamics in the South Sea of Java, Indonesia: A deep learning approach with ConvLSTM and 3D-CNN

Fazidah Othman, Muhammad Mahdy Yandra, Yusuf Jati WIJAYA, Dwi Rantini et al.
MethodsX
Oceanographic and Atmospheric Processes
article

Predicting upwelling dynamics in the South Sea of Java, Indonesia: A deep learning approach with ConvLSTM and 3D-CNN

Fazidah Othman, Muhammad Mahdy Yandra, Yusuf Jati WIJAYA, Dwi Rantini, Hafiz Rahman, Rumaisa Kruba, Arip Ramadan, MuhammadIkhwan, Haditiar, ArisIsmanto
article en

Abstract

Oceans exhibit complex dynamics influenced by climate change, anthropogenic activities, and natural phenomena. Understanding these dynamics is critical for ensuring the sustainability of marine environments and their optimal utilization. This research aims to study and monitor upwelling phenomena in the South Sea of Java. Upwelling, the exchange of nutrient-rich, cold water from deeper layers to the surface, enhances marine biological productivity; Sea Surface Temperature (SST) serves as a key indicator for its detection. To achieve these objectives, this study employs both ConvLSTM and 3D-CNN. ConvLSTM, a deep learning architecture that integrates convolutional structures within LSTM units, effectively captures spatiotemporal dependencies in sequential data. 3D-CNN, a deep learning model extending traditional 2D convolutional neural networks, processes volumetric data, enabling the extraction of spatial features across three dimensions. Analysis reveals that ConvLSTM outperforms 3D-CNN in modeling upwelling data in the South Sea of Java. This is evidenced by lower Root Mean Square Error (RMSE) and Mean Absolute Error (MAE). The ConvLSTM method was then used for forecasting, and the results were validated with data obtained from local fishermen regarding their fishing expeditions. Visual analysis confirms that the ConvLSTM method accurately models upwelling data in the South Sea of Java with fishermen's schedules. ConvLSTM and 3D-CNN methods were comparatively evaluated for modeling Sea Surface Temperature (SST) data, considering wind speed, sea surface salinity, and the El Niño-Southern Oscillation (ENSO) phase as influential factors. Based on Root Mean Square Error (RMSE) and Mean Absolute Error (MAE) values, the ConvLSTM method exhibited lower values, indicating superior performance compared to the 3D-CNN approach. Specifically, RMSE and MAE values for ConvLSTM were 0.4161 and 0.3017, respectively, while for 3D-CNN, the corresponding values were 0.6095 and 0.4259. Upwelling data forecasting results were validated against local fishermen's schedules, with data collected in July 2022. Visual inspection confirmed alignment between the forecasted upwelling patterns and the fishermen's activity.

MethodsXVol. 16
Diponegoro University (ID), University of Surabaya (ID), Universitas Syiah Kuala (ID), Universitas Airlangga (ID), University of Malaya (MY)
Life below water
Openalex Percentile: Top 88%
Oceanographic and Atmospheric Processes
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