Rab4 spatially and functionally converges with Rab7 in the degradative endolysosomal network

Rab GTPases are key regulators of endosomal trafficking in eukaryotes. In mammalian cells, Rab4 and Rab7 were shown to localize to distinct compartments, with Rab4 on early endosomes for fast recycling and Rab7 on late endosomes for degradation. Here, we show that in <i>Drosophila</i>, endogenous Rab4 and Rab7 extensively colocalize across tissues and developmental stages. Recruited to the same compartments through mechanisms that do not require the activity of the other, they have opposing effects on endolysosomal size: Rab4 overexpression or Rab7 impairment leads to enlarged endolysosomes, whereas Rab4 loss or constitutively active Rab7 reduces their sizes. Rab4 deficiency suppresses the swelling induced by Rab7 impairment, and conversely, Rab7 activation mitigates the swelling induced by Rab4 overexpression. Genetically, Rab4 loss selectively compromises the viability of Rab7-deficient flies but not Rab5 or Rab11 mutants, supporting a functional overlap between Rab4 and Rab7. Moreover, the levels of endogenous βPS-Integrin, a cargo recycled by Rab4 and degraded via Rab7, are elevated in <i>rab4</i> mutants and reduced with Rab4 overexpression. Lastly, Rab4 and Rab7 show notable colocalization in mammalian cells and mouse brains, and live imaging reveals dynamic β1-integrin trafficking between Rab4- and Rab7-positive endosomes. Together, these data support that in addition to recycling, Rab4 plays a role in degradation by directing its cargos such as β1-integrin into Rab7-mediated late endolysosomal pathway.

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Publication Details

Journal
Molecular Biology of the Cell
Published
2026-01-15
DOI
https://doi.org/10.1091/mbc.e25-08-0368
Primary Topic
Cellular transport and secretion
Type
article
Field-Weighted Citation Impact
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article

Rab4 spatially and functionally converges with Rab7 in the degradative endolysosomal network

Lili Ye, J. Bellen Hugo, Stephen M. Farmer, H. Yang et al.
Molecular Biology of the Cell
Cellular transport and secretion
article

Rab4 spatially and functionally converges with Rab7 in the degradative endolysosomal network

Lili Ye, J. Bellen Hugo, Stephen M. Farmer, H. Yang, Erin Furr-Stimming, Travis I. Moore, Xin Ye, Yue Yu, Beatriz Rios, Wen-Wen Lin, Vicky Chuong, Daniela Covarrubias, Sheng Zhang, Shiyu Xu, German Zylberberg, Oguz Kanca, Charissa Wang, Qingchun Tong, Jing Cai
article en

Abstract

Rab GTPases are key regulators of endosomal trafficking in eukaryotes. In mammalian cells, Rab4 and Rab7 were shown to localize to distinct compartments, with Rab4 on early endosomes for fast recycling and Rab7 on late endosomes for degradation. Here, we show that in <i>Drosophila</i>, endogenous Rab4 and Rab7 extensively colocalize across tissues and developmental stages. Recruited to the same compartments through mechanisms that do not require the activity of the other, they have opposing effects on endolysosomal size: Rab4 overexpression or Rab7 impairment leads to enlarged endolysosomes, whereas Rab4 loss or constitutively active Rab7 reduces their sizes. Rab4 deficiency suppresses the swelling induced by Rab7 impairment, and conversely, Rab7 activation mitigates the swelling induced by Rab4 overexpression. Genetically, Rab4 loss selectively compromises the viability of Rab7-deficient flies but not Rab5 or Rab11 mutants, supporting a functional overlap between Rab4 and Rab7. Moreover, the levels of endogenous βPS-Integrin, a cargo recycled by Rab4 and degraded via Rab7, are elevated in <i>rab4</i> mutants and reduced with Rab4 overexpression. Lastly, Rab4 and Rab7 show notable colocalization in mammalian cells and mouse brains, and live imaging reveals dynamic β1-integrin trafficking between Rab4- and Rab7-positive endosomes. Together, these data support that in addition to recycling, Rab4 plays a role in degradation by directing its cargos such as β1-integrin into Rab7-mediated late endolysosomal pathway.

Molecular Biology of the CellVol. 37(3)
The University of Texas MD Anderson Cancer Center (US), Baylor College of Medicine (US), Neurological Research Institute (US), Brown Foundation (US), The University of Texas Health Science Center (US), Rice University (US), The University of Texas Health Science Center at Houston (US)
Openalex Percentile: Top 88%
Cellular transport and secretion
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