BreastDCEDL: A standardized deep learning-ready breast DCE-MRI dataset of 2,070 patients

Dynamic Contrast-Enhanced Magnetic Resonance Imaging (DCE-MRI) is essential for monitoring breast cancer treatment response, yet deep learning progress is limited by the lack of standardized, multi-center datasets. We present BreastDCEDL, a deep learning-ready dataset comprising pretreatment 3D DCE-MRI scans from 2,070 patients across three cohorts: I-SPY1 (n = 172), I-SPY2 (n = 982), and Duke (n = 916). Raw DICOM files were converted to standardized 3D NIfTI format, preserving signal integrity and spatial resolution. The dataset includes unified tumor annotations-binary masks for I-SPY cohorts and bounding boxes for Duke-and harmonized clinical metadata. Pathologic complete response (pCR) data are available for 1,452 patients (100% of I-SPY1/I-SPY2, 32.5% of Duke). Clinical biomarkers include HR status (64.1% positive) and HER2 status (22.2% positive) for over 99% of patients. Predefined train-validation-test splits (1,532/268/270) maintain balanced distributions. BreastDCEDL fills a critical gap in public imaging resources, supporting development of advanced models for pCR prediction and other breast cancer analyses. The dataset is designed for broad reuse and is accompanied by processing tools to support community-driven AI research in oncology.

Authors

Institutions

Publication Details

Journal
Scientific Data
Published
2026-01-15
DOI
https://doi.org/10.1038/s41597-026-06589-6
Primary Topic
MRI in cancer diagnosis
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

BreastDCEDL: A standardized deep learning-ready breast DCE-MRI dataset of 2,070 patients

Naomi Fridman, Bubby Solway, Tomer Fridman, Itamar Barnea et al.
Scientific Data
MRI in cancer diagnosis
article

BreastDCEDL: A standardized deep learning-ready breast DCE-MRI dataset of 2,070 patients

Naomi Fridman, Bubby Solway, Tomer Fridman, Itamar Barnea, Anat Goldstein
article en

Abstract

Dynamic Contrast-Enhanced Magnetic Resonance Imaging (DCE-MRI) is essential for monitoring breast cancer treatment response, yet deep learning progress is limited by the lack of standardized, multi-center datasets. We present BreastDCEDL, a deep learning-ready dataset comprising pretreatment 3D DCE-MRI scans from 2,070 patients across three cohorts: I-SPY1 (n = 172), I-SPY2 (n = 982), and Duke (n = 916). Raw DICOM files were converted to standardized 3D NIfTI format, preserving signal integrity and spatial resolution. The dataset includes unified tumor annotations-binary masks for I-SPY cohorts and bounding boxes for Duke-and harmonized clinical metadata. Pathologic complete response (pCR) data are available for 1,452 patients (100% of I-SPY1/I-SPY2, 32.5% of Duke). Clinical biomarkers include HR status (64.1% positive) and HER2 status (22.2% positive) for over 99% of patients. Predefined train-validation-test splits (1,532/268/270) maintain balanced distributions. BreastDCEDL fills a critical gap in public imaging resources, supporting development of advanced models for pCR prediction and other breast cancer analyses. The dataset is designed for broad reuse and is accompanied by processing tools to support community-driven AI research in oncology.

Scientific DataVol. 13(1)
Computer Algorithms for Medicine (AT), Ariel University (IL)
Openalex Percentile: Top 89%
MRI in cancer diagnosis
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.