Microbiota-induced T cell plasticity enables immune-mediated tumour control
Therapies that harness the immune system to target and eliminate tumour cells have revolutionized cancer care. Immune checkpoint blockade (ICB), which boosts the anti-tumour immune response by inhibiting negative regulators of T cell activation<sup>1-3</sup>, is remarkably successful in a subset of cancer patients. Yet a significant proportion do not respond to treatment, emphasizing the need to understand factors influencing the therapeutic efficacy of ICB<sup>4-9</sup>. The gut microbiota, consisting of trillions of microorganisms residing in the gastrointestinal tract, has emerged as a critical determinant of immune function and response to cancer immunotherapy, with several studies demonstrating association of microbiota composition with clinical response<sup>10-16</sup>. However, a mechanistic understanding of how gut commensal bacteria influence the efficacy of ICB remains elusive. Here we use a gut commensal microorganism, segmented filamentous bacteria (SFB), which induces an antigen-specific T helper 17 (T<sub>H</sub>17) cell effector program in the small intestine lamina propria (SILP)<sup>17</sup>, to investigate how colonization with this microbe affects the efficacy of ICB in restraining distal growth of tumours sharing antigen with SFB. We find that anti-programmed cell death protein 1 (PD-1) treatment effectively inhibits the growth of implanted SFB antigen-expressing melanoma only if mice are colonized with SFB. Through T cell receptor (TCR) clonal lineage tracing, fate mapping and peptide-major histocompatability complex (MHC) tetramer staining, we identify tumour-associated SFB-specific T helper 1 (T<sub>H</sub>1)-like cells derived from the homeostatic T<sub>H</sub>17 cells induced by SFB colonization in the SILP. These gut-educated ex-T<sub>H</sub>17 cells produce high levels of the pro-inflammatory cytokines interferon (IFN)-γ and tumour necrosis factor (TNF) within the tumour microenvironment (TME), enhancing antigen presentation and promoting recruitment, expansion and effector functions of CD8<sup>+</sup> tumour-infiltrating cytotoxic lymphocytes and thereby enabling anti-PD-1-mediated tumour control. Conditional ablation of SFB-induced IL-17A<sup>+</sup>CD4<sup>+</sup> T cells, precursors of tumour-associated T<sub>H</sub>1-like cells, abolishes anti-PD-1-mediated tumour control and markedly impairs tumour-specific CD8<sup>+</sup> T cell recruitment and effector function within the TME. Our data, as a proof of principle, define a cellular pathway by which a single, defined intestinal commensal imprints T cell plasticity that potentiates PD-1 blockade, and indicate targeted modulation of the microbiota as a strategy to broaden ICB efficacy.
Authors
- Yuhan Hao (ORCID: https://orcid.org/0009-0009-0105-3917)
- Tariq Ahmad Najar (ORCID: https://orcid.org/0000-0002-2693-5248)
- Alexandra Dolynuk
- Yuan Hao
- Gabriela Romero-Meza
- Emma Almo
Institutions
- Howard Hughes Medical Institute (US)
- NYU Langone Health (US)
- New York Genome Center (US)
- New York University (US)
Publication Details
- Journal
- Nature
- Published
- 2026-01-14
- DOI
- https://doi.org/10.1038/s41586-025-09913-z
- Citations
- 2
- Primary Topic
- Cancer Research and Treatments
- Type
- article
- Field-Weighted Citation Impact
- 55.91