An engineered nanobody inhibitor for molecular-to-circuit control of opioid receptor function

Opioid receptors (ORs) orchestrate pain relief, reward, and dependence, yet their signaling arises from diverse cell types and subcellular compartments that cannot be selectively interrogated with existing pharmacological or genetic approaches. Single-domain antibodies, or nanobodies (Nbs), can probe receptor states, but their potential as tools for controlling native receptor signaling at the system level has remained unexplored. Here, we engineer a suite of high-affinity intracellular Nbs that bind active ORs through structure-guided evolution and in silico design. Iterative optimization yields Nb64, a potent inhibitor that rapidly suppresses transducer engagement, receptor internalization, and downstream signaling, including endogenous pathways in neuronal cells. Organelle targeting highlights Nb64's capacity to control OR activity with subcellular precision, while bio-reversible cell-penetrating peptide (CPP) conjugation enables non-genetic cytosolic delivery. Cell-type-specific expression of Nb64 in VTA interneurons attenuates fentanyl-levoked dopamine release and behavioral responses in mice, demonstrating targeted control of opioid actions in vivo. Nb64 provides a versatile strategy for dissecting OR biology and establishes a generalizable framework for precision inhibition of native GPCR signaling in vivo.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-01-14
DOI
https://doi.org/10.64898/2026.01.12.698943
Primary Topic
Monoclonal and Polyclonal Antibodies Research
Type
article
Field-Weighted Citation Impact
0.00

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article

An engineered nanobody inhibitor for molecular-to-circuit control of opioid receptor function

Jan Vincent V. Arafiles, Arthur Radoux-Mergault, Antoine Koehl, Ziva Shapiro Tuchman et al.
bioRxiv (Cold Spring Harbor Laboratory)
Monoclonal and Polyclonal Antibodies Research
article

An engineered nanobody inhibitor for molecular-to-circuit control of opioid receptor function

Jan Vincent V. Arafiles, Arthur Radoux-Mergault, Antoine Koehl, Ziva Shapiro Tuchman, Nicole M. Fisher, Mark von Zastrow, Miriam Stoeber, Zoé Valbret, Gaoyang Huang, Annika Canziani, Sofia Papadogkonaki, Christian PR Hackenberger, Michey Kosloff, Paul L Lamothe-Molina
article en

Abstract

Opioid receptors (ORs) orchestrate pain relief, reward, and dependence, yet their signaling arises from diverse cell types and subcellular compartments that cannot be selectively interrogated with existing pharmacological or genetic approaches. Single-domain antibodies, or nanobodies (Nbs), can probe receptor states, but their potential as tools for controlling native receptor signaling at the system level has remained unexplored. Here, we engineer a suite of high-affinity intracellular Nbs that bind active ORs through structure-guided evolution and in silico design. Iterative optimization yields Nb64, a potent inhibitor that rapidly suppresses transducer engagement, receptor internalization, and downstream signaling, including endogenous pathways in neuronal cells. Organelle targeting highlights Nb64's capacity to control OR activity with subcellular precision, while bio-reversible cell-penetrating peptide (CPP) conjugation enables non-genetic cytosolic delivery. Cell-type-specific expression of Nb64 in VTA interneurons attenuates fentanyl-levoked dopamine release and behavioral responses in mice, demonstrating targeted control of opioid actions in vivo. Nb64 provides a versatile strategy for dissecting OR biology and establishes a generalizable framework for precision inhibition of native GPCR signaling in vivo.

bioRxiv (Cold Spring Harbor Laboratory)
University of Geneva (CH), University of California, San Francisco (US), University of Zurich (CH), ETH Zurich (CH), Humboldt-Universität zu Berlin (DE), Leibniz-Forschungsinstitut für Molekulare Pharmakologie (DE), University of Haifa (IL), University of California, Berkeley (US)
National Science Foundation, European Commission, Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung, Israel Science Foundation, National Institutes of Health
Openalex Percentile: Top 89%
Monoclonal and Polyclonal Antibodies Research
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