Structure of Supramers Formed by Glycolipid Analogues: SAXS Study

Synthetic glycolipids and similar amphiphils with peptide and other head groups have been designed for labeling/modification of living cells under mild physiological conditions. Under-standing the mechanism of their penetration through the cellular glycocalyx and subsequent insertion into the plasma membrane opens up the prospect of improving the recently found anti-tumor properties of such constructs. In this work, we applied small-angle X-ray scattering (SAXS) technique to characterize structure of nanoparticles formed by self-assembly of synthetic glycolipid A (type 2)-Ad-DE and to estimate its dependence on the glycolipid concentration. The studies were performed at a range of SAXS-applicable concentrations. The obtained results indicate that self-assembly process leads to formation of monodisperse nanoparticles with micelle-like architecture, which is maintained regardless of concentration, indicating absence of the nanoparticle’s positive interaction with their glycopart. We applied ab initio modeling that showed a good agreement with experimental data, and found that the ellipsoid monodisperse nanoparticles have a size of about 14 nm. Quasi-atomic modeling visualised that glycan ligands are well accessed for biological recognition. This knowledge will facilitate further study of the formation of the supramolecular form(s) of A(type 2)-Ad-DE and other glycolipids within the glycocalyx and its further fate in new therapeutic strategies.

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Publication Details

Journal
Bulletin of the Russian Academy of Sciences Physics
Published
2025-12-01
DOI
https://doi.org/10.1134/s1062873825714618
Primary Topic
Supramolecular Self-Assembly in Materials
Type
article
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article

Structure of Supramers Formed by Glycolipid Analogues: SAXS Study

N. V. Bovin, V. A. Dimitreva, V. A. Oleinikov, A. V. Zalygin et al.
Bulletin of the Russian Academy of Sciences Physics
Supramolecular Self-Assembly in Materials
article

Structure of Supramers Formed by Glycolipid Analogues: SAXS Study

N. V. Bovin, V. A. Dimitreva, V. A. Oleinikov, A. V. Zalygin, I. S. Vaskan, E. V. Shtykova, M. V. Petoukhov, I. M. Ryzhov
article en

Abstract

Synthetic glycolipids and similar amphiphils with peptide and other head groups have been designed for labeling/modification of living cells under mild physiological conditions. Under-standing the mechanism of their penetration through the cellular glycocalyx and subsequent insertion into the plasma membrane opens up the prospect of improving the recently found anti-tumor properties of such constructs. In this work, we applied small-angle X-ray scattering (SAXS) technique to characterize structure of nanoparticles formed by self-assembly of synthetic glycolipid A (type 2)-Ad-DE and to estimate its dependence on the glycolipid concentration. The studies were performed at a range of SAXS-applicable concentrations. The obtained results indicate that self-assembly process leads to formation of monodisperse nanoparticles with micelle-like architecture, which is maintained regardless of concentration, indicating absence of the nanoparticle’s positive interaction with their glycopart. We applied ab initio modeling that showed a good agreement with experimental data, and found that the ellipsoid monodisperse nanoparticles have a size of about 14 nm. Quasi-atomic modeling visualised that glycan ligands are well accessed for biological recognition. This knowledge will facilitate further study of the formation of the supramolecular form(s) of A(type 2)-Ad-DE and other glycolipids within the glycocalyx and its further fate in new therapeutic strategies.

Bulletin of the Russian Academy of Sciences PhysicsVol. 89(S2)
P.N. Lebedev Physical Institute of the Russian Academy of Sciences (RU), Frumkin Institute of Physical Chemistry and Electrochemistry Russian Academy of Sciences (RU), Institute of Bioorganic Chemistry (RU), National Research Nuclear University MEPhI (RU)
Openalex Percentile: Top 41%
Supramolecular Self-Assembly in Materials
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