An intelligent ensemble machine learning model for early detection of chronic kidney disease in aging populations

Chronic Kidney Disease (CKD) remains a pressing global public health concern, accounting for approximately 1.7 million deaths annually and disproportionately affecting aging and underserved populations. The increasing burden of CKD, particularly in low-resource settings, underscores the urgent need for early, accurate, and scalable diagnostic tools. This study proposes a hybrid mathematical and artificial intelligence (AI) framework for the early prediction of CKD, with a focus on supporting healthcare strategies in aging and resource-limited communities. Utilizing clinical data from a case-control study conducted in District Buner, Khyber Pakhtunkhwa, Pakistan, the framework incorporates a structured modeling pipeline that involves data preprocessing (feature extraction, missing data imputation, and categorical encoding) and class balancing via the Synthetic Minority Over-Sampling Technique (SMOTE). The proposed system integrates multiple machine learning algorithms, including logistic regression, feedforward neural networks, decision trees, support vector machines, and random forests, within a novel ensemble learning strategy designed to enhance diagnostic precision. Model robustness was assessed using three distinct train–test scenarios: (90%, 10%), (75%, 25%), and (50%, 50%). Performance evaluation employed six metrics: accuracy, specificity, sensitivity, Youden index, Brier score, and F1 score, supported by comprehensive graphical and statistical analysis. The ensemble model consistently outperformed individual classifiers, achieving a mean accuracy of 97.71%, specificity of 97.19%, sensitivity of 99.84%, Youden index of 86.55, Brier score of 1.43%, and F1 score of 98.19%. Support vector machines and random forests ranked second and third, respectively, while decision trees exhibited the lowest performance. To the best of our knowledge, this is the first ensemble-based predictive framework for CKD developed using clinical data from Pakistan. The system holds strong potential for integration into real-world biomedical decision support systems, particularly in aging and underserved populations, thereby contributing to early detection, enhanced care delivery, and optimized resource utilization in the management of chronic diseases.

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Publication Details

Journal
Scientific Reports
Published
2026-01-13
DOI
https://doi.org/10.1038/s41598-025-32919-6
Primary Topic
Chronic Kidney Disease and Diabetes
Type
article
Field-Weighted Citation Impact
0.00
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article

An intelligent ensemble machine learning model for early detection of chronic kidney disease in aging populations

Atef F. Hashem, Rubén Medina, Hasnain Iftikhar, Liban Ali Mohamud et al.
Scientific Reports
Chronic Kidney Disease and Diabetes
article

An intelligent ensemble machine learning model for early detection of chronic kidney disease in aging populations

Atef F. Hashem, Rubén Medina, Hasnain Iftikhar, Liban Ali Mohamud, Javier Linkolk López-Gonzales, A. S. Al-Moisheer
article en

Abstract

Chronic Kidney Disease (CKD) remains a pressing global public health concern, accounting for approximately 1.7 million deaths annually and disproportionately affecting aging and underserved populations. The increasing burden of CKD, particularly in low-resource settings, underscores the urgent need for early, accurate, and scalable diagnostic tools. This study proposes a hybrid mathematical and artificial intelligence (AI) framework for the early prediction of CKD, with a focus on supporting healthcare strategies in aging and resource-limited communities. Utilizing clinical data from a case-control study conducted in District Buner, Khyber Pakhtunkhwa, Pakistan, the framework incorporates a structured modeling pipeline that involves data preprocessing (feature extraction, missing data imputation, and categorical encoding) and class balancing via the Synthetic Minority Over-Sampling Technique (SMOTE). The proposed system integrates multiple machine learning algorithms, including logistic regression, feedforward neural networks, decision trees, support vector machines, and random forests, within a novel ensemble learning strategy designed to enhance diagnostic precision. Model robustness was assessed using three distinct train–test scenarios: (90%, 10%), (75%, 25%), and (50%, 50%). Performance evaluation employed six metrics: accuracy, specificity, sensitivity, Youden index, Brier score, and F1 score, supported by comprehensive graphical and statistical analysis. The ensemble model consistently outperformed individual classifiers, achieving a mean accuracy of 97.71%, specificity of 97.19%, sensitivity of 99.84%, Youden index of 86.55, Brier score of 1.43%, and F1 score of 98.19%. Support vector machines and random forests ranked second and third, respectively, while decision trees exhibited the lowest performance. To the best of our knowledge, this is the first ensemble-based predictive framework for CKD developed using clinical data from Pakistan. The system holds strong potential for integration into real-world biomedical decision support systems, particularly in aging and underserved populations, thereby contributing to early detection, enhanced care delivery, and optimized resource utilization in the management of chronic diseases.

Scientific ReportsVol. 16(1)
Quaid-i-Azam University (PK), Imam Mohammad ibn Saud Islamic University (SA), University of Somalia (SO), University of Peshawar (PK), Catholic University of Santa María (PE), Universidad Peruana Unión (PE)
Openalex Percentile: Top 90%
Chronic Kidney Disease and Diabetes
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