Global solidarity in genomic surveillance improves early detection of acute respiratory virus threats

As genomic surveillance is key to detecting novel respiratory viruses or variants, the highly unequal global distribution of respiratory virus sequencing infrastructure raises concerns about preparedness for future threats. Using mathematical models and global epidemic simulations, we demonstrate that attaining a global minimum sequencing capacity of two sequences per million people per week at fortnightly sequencing regularity could reduce the time to first detection of novel respiratory (variant) viruses by weeks to months compared to global sequencing efforts during the COVID-19 pandemic, even with a substantially reduced number of viruses sequenced globally. Establishing this minimum global capacity could increase the time between the virus' first global detection and the first domestic case in all countries, universally improving prospects for mitigation of potential public health impacts. Importantly, these benefits cannot be attained by siloed expansion in countries that already possess strong capacity. Our results show that operationalizing global health solidarity is key to guiding investment in health security.

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Publication Details

Journal
Nature Communications
Published
2026-01-13
DOI
https://doi.org/10.1038/s41467-025-67442-9
Primary Topic
Respiratory viral infections research
Type
article
Field-Weighted Citation Impact
0.00

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article

Global solidarity in genomic surveillance improves early detection of acute respiratory virus threats

M A J De Jong, Vera Mitesser, Tiffany Christian, Alvin X. Han et al.
Nature Communications
Respiratory viral infections research
article

Global solidarity in genomic surveillance improves early detection of acute respiratory virus threats

M A J De Jong, Vera Mitesser, Tiffany Christian, Alvin X. Han, Anniek de Ruijter, Brooke E Nichols, de Jong, Colin A. Russell, Edyth Parker
article en

Abstract

As genomic surveillance is key to detecting novel respiratory viruses or variants, the highly unequal global distribution of respiratory virus sequencing infrastructure raises concerns about preparedness for future threats. Using mathematical models and global epidemic simulations, we demonstrate that attaining a global minimum sequencing capacity of two sequences per million people per week at fortnightly sequencing regularity could reduce the time to first detection of novel respiratory (variant) viruses by weeks to months compared to global sequencing efforts during the COVID-19 pandemic, even with a substantially reduced number of viruses sequenced globally. Establishing this minimum global capacity could increase the time between the virus' first global detection and the first domestic case in all countries, universally improving prospects for mitigation of potential public health impacts. Importantly, these benefits cannot be attained by siloed expansion in countries that already possess strong capacity. Our results show that operationalizing global health solidarity is key to guiding investment in health security.

Nature CommunicationsVol. 17(1)
Boston University (US), FIND (CH), Redeemer's University (NG), Amsterdam Institute for Global Health and Development (NL), Amsterdam University Medical Centers (NL), Amsterdam University of Applied Sciences (NL), University of Amsterdam (NL)
ZonMw
Openalex Percentile: Top 89%
Respiratory viral infections research
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