Measuring the accuracy of electronic health record-based phenotyping in the <i>All of Us</i> Research Program to optimize statistical power for genetic association testing

EHR-based phenotyping presents a bottleneck for maximizing power to detect novel risk alleles in All of Us, as well as a potential source of differential outcome misclassification that researchers should be aware of. We discuss the implications of this as well as potential mitigation strategies.

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Publication Details

Journal
Journal of the American Medical Informatics Association
Published
2026-01-03
DOI
https://doi.org/10.1093/jamia/ocaf234
Primary Topic
Genetic Associations and Epidemiology
Type
article
Field-Weighted Citation Impact
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article

Measuring the accuracy of electronic health record-based phenotyping in the All of Us Research Program to optimize statistical power for genetic association testing

Yi-Wen Hsiao, Pei-Chen Peng, John Baierl, Paul D. P. Pharoah et al.
Journal of the American Medical Informatics Association
Genetic Associations and Epidemiology
article

Measuring the accuracy of electronic health record-based phenotyping in the All of Us Research Program to optimize statistical power for genetic association testing

Yi-Wen Hsiao, Pei-Chen Peng, John Baierl, Paul D. P. Pharoah, Michelle R Jones
article en

Abstract

EHR-based phenotyping presents a bottleneck for maximizing power to detect novel risk alleles in All of Us, as well as a potential source of differential outcome misclassification that researchers should be aware of. We discuss the implications of this as well as potential mitigation strategies.

Journal of the American Medical Informatics AssociationVol. 33(3)
Cedars-Sinai Medical Center (US)
Climate action
Openalex Percentile: Top 90%
Genetic Associations and Epidemiology
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