Visualization of the complete primosome reveals the structural mechanisms governing DNA replication restart

Replication restart pathways reinitiate DNA replication processes following their premature termination. In <i>Escherichia coli</i>, this essential process begins with the regulated assembly of the primosome complex, comprising the PriA, PriB, and DnaT proteins, onto an abandoned replication fork. Here, we present two distinct primosome structures. One represents an intermediate stage in primosome assembly with a single DnaT C-terminal domain (DnaT<sup>CTD</sup>) bound to PriA/PriB/DNA. The second captures the mature primosome, in which filamentation of multiple DnaT<sup>CTD</sup> molecules catalyzes the handoff of the single-stranded DNA lagging strand from PriB to DnaT. The DnaT N-terminal domain forms a separate, independent oligomer in the mature structure. Taken together, our results detail the molecular mechanisms underlying replication restart initiation and regulation and suggest an unexpected mechanistic similarity between DnaT and the canonical initiator protein DnaA.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-01-13
DOI
https://doi.org/10.64898/2026.01.13.699284
Primary Topic
DNA Repair Mechanisms
Type
article
Field-Weighted Citation Impact
0.00

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article

Visualization of the complete primosome reveals the structural mechanisms governing DNA replication restart

Alexander T. Duckworth, Kenneth A. Satyshur, James L. Keck, Peter Ducos et al.
bioRxiv (Cold Spring Harbor Laboratory)
DNA Repair Mechanisms
article

Visualization of the complete primosome reveals the structural mechanisms governing DNA replication restart

Alexander T. Duckworth, Kenneth A. Satyshur, James L. Keck, Peter Ducos, Timothy Grant
article en

Abstract

Replication restart pathways reinitiate DNA replication processes following their premature termination. In <i>Escherichia coli</i>, this essential process begins with the regulated assembly of the primosome complex, comprising the PriA, PriB, and DnaT proteins, onto an abandoned replication fork. Here, we present two distinct primosome structures. One represents an intermediate stage in primosome assembly with a single DnaT C-terminal domain (DnaT<sup>CTD</sup>) bound to PriA/PriB/DNA. The second captures the mature primosome, in which filamentation of multiple DnaT<sup>CTD</sup> molecules catalyzes the handoff of the single-stranded DNA lagging strand from PriB to DnaT. The DnaT N-terminal domain forms a separate, independent oligomer in the mature structure. Taken together, our results detail the molecular mechanisms underlying replication restart initiation and regulation and suggest an unexpected mechanistic similarity between DnaT and the canonical initiator protein DnaA.

bioRxiv (Cold Spring Harbor Laboratory)
University of Wisconsin–Madison (US), Morgridge Institute for Research (US)
University of Wisconsin-Madison, National Institutes of Health
Openalex Percentile: Top 89%
DNA Repair Mechanisms
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