MicroDeblurNet: high-fidelity restoration of spatially variant defocus in microscopic images for cucumber downy mildew

Microscopic imaging provides essential visual evidence for pathogen monitoring, but its shallow depth of field and the three-dimensional height variation of spores lead to pronounced defocus blur and structural degradation. Restoring such images is therefore crucial for reliable spore identification and downstream analysis. However, microscopic defocus is a spatially varying process that severely suppresses high-frequency structures, causing natural-image deblurring models to generalize poorly. In addition, optical constraints of microscopy make realistic sharp-blur pairs difficult to obtain, further limiting learning-based restoration. To address these challenges, we propose MicroDeblurNet, a single-image deblurring network specifically designed for microscopic defocus restoration. The model incorporates a convolutional block attention module to enhance spatial selectivity toward key pathogen structures, and employs depthwise over-parameterized convolutions to capture locally varying blur patterns more effectively, enabling spatially consistent and structurally coherent restoration. Furthermore, a spatial-frequency consistency loss is proposed to strengthen high-frequency detail recovery while maintaining color fidelity and morphological integrity. To support high-fidelity supervision, we propose a paired-data construction strategy based on Laplacian-pyramid fusion and construct a clear-blur microscopic dataset for cucumber downy mildew. The restored outputs of MicroDeblurNet are further applied to sporangia detection and semantic segmentation to evaluate their impact on high-level visual tasks. Finally, we build an integrated microscopic analysis platform that delivers standardized high-quality data and automated pathogen-structure recognition and analysis to support disease assessment and management. Experimental results demonstrate that MicroDeblurNet achieves an optimal balance across pixel-level, structure-level, and perception-level metrics, reaching a PSNR of 42.48 dB and SSIM of 0.9839, outperforming advanced state-of-the-art methods. In downstream tasks, MicroDeblurNet delivers higher detection recall and segmentation accuracy in challenging scenarios involving sporangia adhesion and background impurities, demonstrating its ability to enhance target discernibility, preserve structural completeness, and improve robustness under complex microscopic conditions.

Authors

Institutions

Publication Details

Journal
Plant Methods
Published
2026-01-13
DOI
https://doi.org/10.1186/s13007-025-01495-1
Citations
2
Primary Topic
Smart Agriculture and AI
Type
article
Field-Weighted Citation Impact
62.68
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

MicroDeblurNet: high-fidelity restoration of spatially variant defocus in microscopic images for cucumber downy mildew

Yuzhaobi Song, Yuqi Zhang, Xiaoshuan Zhang, Lingxian Zhang et al.
2 citations
Plant Methods
Smart Agriculture and AI
62.68
article

MicroDeblurNet: high-fidelity restoration of spatially variant defocus in microscopic images for cucumber downy mildew

Yuzhaobi Song, Yuqi Zhang, Xiaoshuan Zhang, Lingxian Zhang, Bo Wang, Zonghuan Han
article en
2 citations

Abstract

Microscopic imaging provides essential visual evidence for pathogen monitoring, but its shallow depth of field and the three-dimensional height variation of spores lead to pronounced defocus blur and structural degradation. Restoring such images is therefore crucial for reliable spore identification and downstream analysis. However, microscopic defocus is a spatially varying process that severely suppresses high-frequency structures, causing natural-image deblurring models to generalize poorly. In addition, optical constraints of microscopy make realistic sharp-blur pairs difficult to obtain, further limiting learning-based restoration. To address these challenges, we propose MicroDeblurNet, a single-image deblurring network specifically designed for microscopic defocus restoration. The model incorporates a convolutional block attention module to enhance spatial selectivity toward key pathogen structures, and employs depthwise over-parameterized convolutions to capture locally varying blur patterns more effectively, enabling spatially consistent and structurally coherent restoration. Furthermore, a spatial-frequency consistency loss is proposed to strengthen high-frequency detail recovery while maintaining color fidelity and morphological integrity. To support high-fidelity supervision, we propose a paired-data construction strategy based on Laplacian-pyramid fusion and construct a clear-blur microscopic dataset for cucumber downy mildew. The restored outputs of MicroDeblurNet are further applied to sporangia detection and semantic segmentation to evaluate their impact on high-level visual tasks. Finally, we build an integrated microscopic analysis platform that delivers standardized high-quality data and automated pathogen-structure recognition and analysis to support disease assessment and management. Experimental results demonstrate that MicroDeblurNet achieves an optimal balance across pixel-level, structure-level, and perception-level metrics, reaching a PSNR of 42.48 dB and SSIM of 0.9839, outperforming advanced state-of-the-art methods. In downstream tasks, MicroDeblurNet delivers higher detection recall and segmentation accuracy in challenging scenarios involving sporangia adhesion and background impurities, demonstrating its ability to enhance target discernibility, preserve structural completeness, and improve robustness under complex microscopic conditions.

Plant MethodsVol. 22(1)
Ministry of Agriculture and Rural Affairs (CN), China Agricultural University (CN)
Sustainable cities and communities
Openalex Percentile: Top 0%
Smart Agriculture and AI
62.68
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.