From multi-omics to functional validation: the PTMRS stratifies TME and positions PDGFRB in CRC biology

We established a post-translational modification-related risk signature (PTMRS) that robustly stratifies CRC prognosis and links tumor-intrinsic programs with features of the TIME. Higher PTMRS scores, particularly in tumors with <i>PDGFRB</i> enrichment, were associated with a stroma-rich, immune-cold phenotype. Experimental validation highlighted PDGFRβ in colonic fibroblasts as a stromal hub whose activation promotes CRC cell proliferation and migration. These findings suggest that PTMRS may help identify patients who could benefit from combining immunotherapy with therapies targeting PDGFRβ or other PTM-related pathways. Further validation in <i>in vivo</i> models and prospective clinical cohorts is needed.

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Publication Details

Journal
Frontiers in Immunology
Published
2026-01-12
DOI
https://doi.org/10.3389/fimmu.2025.1728291
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
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article

From multi-omics to functional validation: the PTMRS stratifies TME and positions PDGFRB in CRC biology

Zongyou Zou, Yanhong Liu, Q. ZHANG, Luchun Hua et al.
Frontiers in Immunology
Single-cell and spatial transcriptomics
article

From multi-omics to functional validation: the PTMRS stratifies TME and positions PDGFRB in CRC biology

Zongyou Zou, Yanhong Liu, Q. ZHANG, Luchun Hua, Jianbin Xiang, Chao Lu
article en

Abstract

We established a post-translational modification-related risk signature (PTMRS) that robustly stratifies CRC prognosis and links tumor-intrinsic programs with features of the TIME. Higher PTMRS scores, particularly in tumors with <i>PDGFRB</i> enrichment, were associated with a stroma-rich, immune-cold phenotype. Experimental validation highlighted PDGFRβ in colonic fibroblasts as a stromal hub whose activation promotes CRC cell proliferation and migration. These findings suggest that PTMRS may help identify patients who could benefit from combining immunotherapy with therapies targeting PDGFRβ or other PTM-related pathways. Further validation in <i>in vivo</i> models and prospective clinical cohorts is needed.

Frontiers in ImmunologyVol. 16
Shanghai Medical College of Fudan University (CN), Fudan University (CN), Huashan Hospital (CN)
Openalex Percentile: Top 91%
Single-cell and spatial transcriptomics
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