VST-DAVis: an R Shiny application and web-browser for spatial transcriptomics data analysis and visualization

VST-DAVis is freely available at https://www.gudalab-rtools.net/VST-DAVis. It is implemented in R 4.5.2 and Bioconductor ≥ 3.22 using the Shiny framework and supports input from Space Ranger outputs. The source code and documentation are hosted on GitHub: https://github.com/GudaLab/VST-DAVis.

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Publication Details

Journal
Bioinformatics Advances
Published
2026-01-01
DOI
https://doi.org/10.1093/bioadv/vbag007
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
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article

VST-DAVis: an R Shiny application and web-browser for spatial transcriptomics data analysis and visualization

Jagadesan Sankarasubramanian, Chittibabu Guda
Bioinformatics Advances
Single-cell and spatial transcriptomics
article

VST-DAVis: an R Shiny application and web-browser for spatial transcriptomics data analysis and visualization

Jagadesan Sankarasubramanian, Chittibabu Guda
article en

Abstract

VST-DAVis is freely available at https://www.gudalab-rtools.net/VST-DAVis. It is implemented in R 4.5.2 and Bioconductor ≥ 3.22 using the Shiny framework and supports input from Space Ranger outputs. The source code and documentation are hosted on GitHub: https://github.com/GudaLab/VST-DAVis.

Bioinformatics AdvancesVol. 6(1)
Nebraska Medical Center (US), University of Nebraska Medical Center (US)
Openalex Percentile: Top 91%
Single-cell and spatial transcriptomics
DOIOpen Access PDFOpenAlex
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VST-DAVis: an R Shiny application and web-browser for spatial transcriptomics data analysis and visualization — Jagadesan Sankarasubramanian, Chittibabu Guda · Bioinformatics Advances (2026) | TGRS Research Map | TGRS