Capturing gene–cell duality in a cat’s cradle
CatsCradle is available freely as an R Bioconductor package (https://bioconductor.org/packages/CatsCradle) and interfaces directly with Seurat (Hao et al. 2024) and SingleCellExperiment (Amezquita et al. 2020) data structures.
Authors
- Vassilis Pachnis (ORCID: https://orcid.org/0000-0001-9733-7686)
- Michael Shapiro (ORCID: https://orcid.org/0000-0002-2769-9320)
- Fränze Progatzky (ORCID: https://orcid.org/0000-0003-0784-1323)
- Anna Laddach (ORCID: https://orcid.org/0000-0001-5552-6534)
Institutions
- The Francis Crick Institute (GB)
- CRUK/MRC Oxford Institute for Radiation Oncology (GB)
- Swiss Data Science Center (CH)
Publication Details
- Journal
- Bioinformatics
- Published
- 2026-01-01
- DOI
- https://doi.org/10.1093/bioinformatics/btaf681
- Primary Topic
- Single-cell and spatial transcriptomics
- Type
- article
- Field-Weighted Citation Impact
- 0.00