Application value of Xpert Carba-R combined with LAMP in the diagnosis and prognosis of carbapenem-resistant Gram-negative bacilli pneumonia

An urgent clinical need exists for rapid detection of carbapenem-resistant Gram-negative bacilli (CR-GNB) in respiratory specimens to facilitate early and precise antibiotic therapy. To address this gap, we developed an innovative dual-method assay: Xpert Carba-R to detect five major carbapenemases, and loop-mediated isothermal amplification (LAMP) to identify common Gram-negative respiratory pathogens. Integration of these methods enables simultaneous and early determination of bacterial species and their resistance profiles. We validated this assay against conventional culture-based antimicrobial susceptibility testing (AST) and assessed its clinical impact on patient outcomes. Results indicate that this integrated approach provides clinically actionable data, serving as a viable alternative to conventional diagnostic workflows.This study is registered with the Chinese Clinical Trial Registry as ChiCTR2400090694.

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Publication Details

Journal
Microbiology Spectrum
Published
2026-01-09
DOI
https://doi.org/10.1128/spectrum.02130-25
Primary Topic
Bacterial Identification and Susceptibility Testing
Type
article
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article

Application value of Xpert Carba-R combined with LAMP in the diagnosis and prognosis of carbapenem-resistant Gram-negative bacilli pneumonia

Xinghui Gao, C H Liu, Jingjing Sun, Yunfei Zhu et al.
Microbiology Spectrum
Bacterial Identification and Susceptibility Testing
article

Application value of Xpert Carba-R combined with LAMP in the diagnosis and prognosis of carbapenem-resistant Gram-negative bacilli pneumonia

Xinghui Gao, C H Liu, Jingjing Sun, Yunfei Zhu, Jiannan Hu, Shuyun Xu, Minrong Liu, Xinyue Ma, Decai Wang, Yi-Wei Tang
article en

Abstract

An urgent clinical need exists for rapid detection of carbapenem-resistant Gram-negative bacilli (CR-GNB) in respiratory specimens to facilitate early and precise antibiotic therapy. To address this gap, we developed an innovative dual-method assay: Xpert Carba-R to detect five major carbapenemases, and loop-mediated isothermal amplification (LAMP) to identify common Gram-negative respiratory pathogens. Integration of these methods enables simultaneous and early determination of bacterial species and their resistance profiles. We validated this assay against conventional culture-based antimicrobial susceptibility testing (AST) and assessed its clinical impact on patient outcomes. Results indicate that this integrated approach provides clinically actionable data, serving as a viable alternative to conventional diagnostic workflows.This study is registered with the Chinese Clinical Trial Registry as ChiCTR2400090694.

Microbiology SpectrumVol. 14(2)
Danaher (United States) (US), Huazhong University of Science and Technology (CN)
Good health and well-being
Openalex Percentile: Top 93%
Bacterial Identification and Susceptibility Testing
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