<i>N'</i> ‐Isonicotinoylnicotinohydrazonamide: Synthesis, Crystal Structure and Computational Studies

ABSTRACT An Isoniazid derivative, N' ‐isonicotinoylnicotinohydrazonamide ( 1 ), was synthesized via a reaction between Isoniazid and 3‐cyanopyridine. It was established that 1 adopts a keto conformation in the solid state, forming a 2D supramolecular network stabilized by N─H⋯O and N─H⋯N hydrogen bonds. The NMR studies indicated the presence of two conformational isomers, a behavior attributed to the greater flexibility imparted by the meta ‐positioned nitrogen in the nicotinoyl moiety, in contrast to its rigid picolinoyl‐containing isomer 2 , which was reported by us previously. Hirshfeld surface analysis quantified the intermolecular interactions of 1 , identifying H⋯H, H⋯C, H⋯N, and H⋯O contacts as the most significant contributors to the crystal packing. DFT calculations provided insights into the electronic structure, molecular electrostatic potential, and global reactivity descriptors, which characterized 1 as a strong electrophile. A combined QTAIM/NCI analysis confirmed the presence of prominent intramolecular interactions. In silico ADMET profiling of 1 predicted a favorable pharmacokinetic profile with high gastrointestinal absorption but potential hepatotoxicity and neurotoxicity. Molecular docking studies against key Mycobacterium tuberculosis proteins, viz. Proteasomal ATPase Mpa, Serine/threonine‐protein kinase, and Arabinosyltransferase, demonstrated that 1 exhibits superior binding affinity and ligand efficiency compared to the parent Isoniazid, suggesting its potential as a promising lead compound for anti‐tuberculosis drug development.

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Journal
Asian Journal of Organic Chemistry
Published
2026-01-01
DOI
https://doi.org/10.1002/ajoc.70292
Primary Topic
Crystallography and molecular interactions
Type
article
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article

N' ‐Isonicotinoylnicotinohydrazonamide: Synthesis, Crystal Structure and Computational Studies

Atash V. Gurbanov, D. A. Safin, Ömer Faruk Tutar, Marjan Abedi et al.
Asian Journal of Organic Chemistry
Crystallography and molecular interactions
article

N' ‐Isonicotinoylnicotinohydrazonamide: Synthesis, Crystal Structure and Computational Studies

Atash V. Gurbanov, D. A. Safin, Ömer Faruk Tutar, Marjan Abedi, Ghodrat Mahmoudi, Raymond J. Butcher, Elizaveta V. Panova
article en

Abstract

ABSTRACT An Isoniazid derivative, N' ‐isonicotinoylnicotinohydrazonamide ( 1 ), was synthesized via a reaction between Isoniazid and 3‐cyanopyridine. It was established that 1 adopts a keto conformation in the solid state, forming a 2D supramolecular network stabilized by N─H⋯O and N─H⋯N hydrogen bonds. The NMR studies indicated the presence of two conformational isomers, a behavior attributed to the greater flexibility imparted by the meta ‐positioned nitrogen in the nicotinoyl moiety, in contrast to its rigid picolinoyl‐containing isomer 2 , which was reported by us previously. Hirshfeld surface analysis quantified the intermolecular interactions of 1 , identifying H⋯H, H⋯C, H⋯N, and H⋯O contacts as the most significant contributors to the crystal packing. DFT calculations provided insights into the electronic structure, molecular electrostatic potential, and global reactivity descriptors, which characterized 1 as a strong electrophile. A combined QTAIM/NCI analysis confirmed the presence of prominent intramolecular interactions. In silico ADMET profiling of 1 predicted a favorable pharmacokinetic profile with high gastrointestinal absorption but potential hepatotoxicity and neurotoxicity. Molecular docking studies against key Mycobacterium tuberculosis proteins, viz. Proteasomal ATPase Mpa, Serine/threonine‐protein kinase, and Arabinosyltransferase, demonstrated that 1 exhibits superior binding affinity and ligand efficiency compared to the parent Isoniazid, suggesting its potential as a promising lead compound for anti‐tuberculosis drug development.

Asian Journal of Organic ChemistryVol. 15(1)
Doğuş University (TR), Howard University (US), University of Maragheh (IR), Baku State University (AZ), University of Tyumen (RU), Industrial University of Tyumen (RU), Istinye University (TR), University of Mohaghegh Ardabili (IR)
Openalex Percentile: Top 91%
Crystallography and molecular interactions
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