Towards Patient Anatomy-Based Simulation of Net Cerebrospinal Fluid Flow in the Intracranial Compartment

Biophysics-based, patient-specific modeling remains challenging for clinical translation, particularly for cerebrospinal fluid (CSF) flow where anatomical detail and computational cost are tightly coupled. We present a computational framework for steady net CSF redistribution in an MRI-derived cranial CSF domain reconstructed from T2-weighted imaging, including the ventricular system, cranial subarachnoid space, and periarterial pathways, to the extent resolvable by clinical MRI. Cranial CSF spaces were segmented in 3D Slicer and a steady Darcy formulation with prescribed CSF production/absorption was solved in COMSOL Multiphysics®. Geometrical and flow descriptors were quantified using region-based projection operations. We assessed discretization cost–accuracy trade-offs by comparing first- and second-order finite elements. First-order elements produced a 1.4% difference in transmantle pressure and a <10% difference in element-wise mass-weighted velocity metric for 90% of elements, while reducing computation time by 75% (20 to 5 min) and peak memory usage five-fold (150 to 30 GB). This proof-of-concept framework provides a computationally tractable baseline for studying steady net CSF pathway redistribution and sensitivity to boundary assumptions, and may support future patient-specific investigations in pathological conditions such as subarachnoid hemorrhage, hydrocephalus and brain tumors.

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Publication Details

Journal
Applied Sciences
Published
2026-01-07
DOI
https://doi.org/10.3390/app16020611
Primary Topic
Cerebrospinal fluid and hydrocephalus
Type
article
Field-Weighted Citation Impact
0.00

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Towards Patient Anatomy-Based Simulation of Net Cerebrospinal Fluid Flow in the Intracranial Compartment

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Cerebrospinal fluid and hydrocephalus
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Towards Patient Anatomy-Based Simulation of Net Cerebrospinal Fluid Flow in the Intracranial Compartment

Alina Barkauskienė, Aidanas Preikšaitis, Gediminas Skarbalius, Vytautas Petkus, Robertas Alzbutas, Saulius Lukoševičius, Mindaugas Šerpytis, Jewel Sengupta, Tomas Iešmantas, Indre Lapinskienė, Robertas Navakas, Vytenis Ratkunas, Edgaras Misiulis, Algis Džiugys
article en

Abstract

Biophysics-based, patient-specific modeling remains challenging for clinical translation, particularly for cerebrospinal fluid (CSF) flow where anatomical detail and computational cost are tightly coupled. We present a computational framework for steady net CSF redistribution in an MRI-derived cranial CSF domain reconstructed from T2-weighted imaging, including the ventricular system, cranial subarachnoid space, and periarterial pathways, to the extent resolvable by clinical MRI. Cranial CSF spaces were segmented in 3D Slicer and a steady Darcy formulation with prescribed CSF production/absorption was solved in COMSOL Multiphysics®. Geometrical and flow descriptors were quantified using region-based projection operations. We assessed discretization cost–accuracy trade-offs by comparing first- and second-order finite elements. First-order elements produced a 1.4% difference in transmantle pressure and a <10% difference in element-wise mass-weighted velocity metric for 90% of elements, while reducing computation time by 75% (20 to 5 min) and peak memory usage five-fold (150 to 30 GB). This proof-of-concept framework provides a computationally tractable baseline for studying steady net CSF pathway redistribution and sensitivity to boundary assumptions, and may support future patient-specific investigations in pathological conditions such as subarachnoid hemorrhage, hydrocephalus and brain tumors.

Applied SciencesVol. 16(2)
Lithuanian University of Health Sciences (LT), Kaunas University of Technology (LT), Vilnius University (LT), Lithuanian Energy Institute (LT), Vilnius University Hospital Santariskiu Klinikos (LT)
Lietuvos Mokslo Taryba
Partnerships for the goals
Openalex Percentile: Top 94%
Cerebrospinal fluid and hydrocephalus
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