Construction of a Normalized Library and Screening of Transcriptional Regulators of the cas5 Gene in Corynespora cassiicola

In tropical rubber-growing regions, <i>Corynespora</i> leaf fall disease stands as a predominant and economically significant threat to rubber trees. The toxin protein encoded by the <i>cas5</i> gene is the main pathogenic factor of <i>Corynespora cassiicola</i>. To identify transcription factors capable of binding with the <i>cas5</i> gene promoter sequence of <i>C. cassiicola</i>, the promoter of the <i>cas5</i> gene was predicted by bioinformatics, and the 1000 bp promoter of the <i>cas5</i> gene was isolated to construct a yeast one-hybrid bait vector for self-activation detection. A yeast one-hybrid cDNA expression library of <i>C. cassiicola</i> was constructed to screen for potential transcriptional regulators interacting with the 1000 bp promoter of the <i>cas5</i> gene. The transcriptional regulators interacting with the <i>cas5</i> gene were determined by the yeast one-hybrid (Y1H) point-to-point verification experiment. Y1H results showed that the bait vector did not have self-activation. The cDNA library had a titer of 2.516 × 10<sup>8</sup> cfu/mL and a total clone count of 5.032 × 10<sup>8</sup>. Screening identified 30 candidate transcriptional regulators. Through point-to-point yeast one-hybrid verification, only one of the 30 candidate transcription factors (named CcbZIP3629) showed interaction with <i>cas5.</i> Molecular docking was performed using the AlphaFold3-predicted structure of CcbZIP3629, which revealed its binding to two ACGT core motifs within the promoter. These findings provide the groundwork for elucidating the regulatory mechanism of the <i>cas5</i> gene, particularly by which CcbZIP3629 mediates the expression of the Cc-Cas5 toxin.

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Journal
Microorganisms
Published
2026-01-07
DOI
https://doi.org/10.3390/microorganisms14010129
Primary Topic
Plant biochemistry and biosynthesis
Type
article
Field-Weighted Citation Impact
0.00

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article

Construction of a Normalized Library and Screening of Transcriptional Regulators of the cas5 Gene in Corynespora cassiicola

Muhammad Zaryab Khalid, Jijin Hou, Guohao Hu, Tong Liu et al.
Microorganisms
Plant biochemistry and biosynthesis
article

Construction of a Normalized Library and Screening of Transcriptional Regulators of the cas5 Gene in Corynespora cassiicola

Muhammad Zaryab Khalid, Jijin Hou, Guohao Hu, Tong Liu, ZiPing Yang, Raja Asad Ali Khan, Baoping Zhu, Musharaf Ahmad
article en

Abstract

In tropical rubber-growing regions, <i>Corynespora</i> leaf fall disease stands as a predominant and economically significant threat to rubber trees. The toxin protein encoded by the <i>cas5</i> gene is the main pathogenic factor of <i>Corynespora cassiicola</i>. To identify transcription factors capable of binding with the <i>cas5</i> gene promoter sequence of <i>C. cassiicola</i>, the promoter of the <i>cas5</i> gene was predicted by bioinformatics, and the 1000 bp promoter of the <i>cas5</i> gene was isolated to construct a yeast one-hybrid bait vector for self-activation detection. A yeast one-hybrid cDNA expression library of <i>C. cassiicola</i> was constructed to screen for potential transcriptional regulators interacting with the 1000 bp promoter of the <i>cas5</i> gene. The transcriptional regulators interacting with the <i>cas5</i> gene were determined by the yeast one-hybrid (Y1H) point-to-point verification experiment. Y1H results showed that the bait vector did not have self-activation. The cDNA library had a titer of 2.516 × 10<sup>8</sup> cfu/mL and a total clone count of 5.032 × 10<sup>8</sup>. Screening identified 30 candidate transcriptional regulators. Through point-to-point yeast one-hybrid verification, only one of the 30 candidate transcription factors (named CcbZIP3629) showed interaction with <i>cas5.</i> Molecular docking was performed using the AlphaFold3-predicted structure of CcbZIP3629, which revealed its binding to two ACGT core motifs within the promoter. These findings provide the groundwork for elucidating the regulatory mechanism of the <i>cas5</i> gene, particularly by which CcbZIP3629 mediates the expression of the Cc-Cas5 toxin.

MicroorganismsVol. 14(1)
Chinese Academy of Tropical Agricultural Sciences (CN), Hainan University (CN), The University of Agriculture, Peshawar (PK)
National Natural Science Foundation of China
Life in Land
Openalex Percentile: Top 94%
Plant biochemistry and biosynthesis
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