Unveiling n → π* interactions: convergence of quantum crystallography and computational insights

We report the identification and characterization of a n → π* interaction between halide anions and a cationic purine nucleobase. Through a combined quantum crystallographic and computational approach, we demonstrate that perpendicular anion⋯(sp<sup>2</sup>)carbon contacts occur consistently at the C2 position of the purine nucleobase, with geometries and energies comparable to hydrogen bonds. High-resolution X-ray charge density analysis of 2[Br]·H<sub>2</sub>O confirms the existence of a bond path and an electron density depletion on C2, supporting a charge-transfer interaction. Complementary theoretical studies reveal a lone pair-to-π* orbital delocalization mechanism, with second-order NBO energies up to 6 kcal mol<sup>-1</sup>. The interaction persists with various anions, hydration levels, and C2 substitutions, highlighting its robustness and potential relevance in supramolecular chemistry. This study provides the experimental validation of an n → π* contact, supported by topological and electrostatic descriptors.

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Publication Details

Journal
Dalton Transactions
Published
2026-01-01
DOI
https://doi.org/10.1039/d5dt02386f
Primary Topic
Crystallography and molecular interactions
Type
article
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article

Unveiling n → π* interactions: convergence of quantum crystallography and computational insights

Jorge Echeverría, Pablo J. Sanz Miguel, Pilar García‐Orduña, Alvaro Polo
Dalton Transactions
Crystallography and molecular interactions
article

Unveiling n → π* interactions: convergence of quantum crystallography and computational insights

Jorge Echeverría, Pablo J. Sanz Miguel, Pilar García‐Orduña, Alvaro Polo
article en

Abstract

We report the identification and characterization of a n → π* interaction between halide anions and a cationic purine nucleobase. Through a combined quantum crystallographic and computational approach, we demonstrate that perpendicular anion⋯(sp<sup>2</sup>)carbon contacts occur consistently at the C2 position of the purine nucleobase, with geometries and energies comparable to hydrogen bonds. High-resolution X-ray charge density analysis of 2[Br]·H<sub>2</sub>O confirms the existence of a bond path and an electron density depletion on C2, supporting a charge-transfer interaction. Complementary theoretical studies reveal a lone pair-to-π* orbital delocalization mechanism, with second-order NBO energies up to 6 kcal mol<sup>-1</sup>. The interaction persists with various anions, hydration levels, and C2 substitutions, highlighting its robustness and potential relevance in supramolecular chemistry. This study provides the experimental validation of an n → π* contact, supported by topological and electrostatic descriptors.

Dalton TransactionsVol. 55(7)
Universidad de Zaragoza (ES), Instituto de Síntesis Química y Catálisis Homogénea (ES)
Openalex Percentile: Top 92%
Crystallography and molecular interactions
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