Electric fields enhance Diels–Alderase catalysis in abyssomicin C biosynthesis

Natural Diels-Alderases catalyse [4+2] cycloadditions by preorganizing substrates into reactive conformations. However, the roles of other catalytic factors, such as electrostatic effects, remain elusive. Here, we combine conceptual density functional theory (CDFT) descriptors and electric field analysis to unravel the electrostatic basis of activity in the Diels-Alderase AbyU. Previously, four different enzyme-substrate poses were identified, of which two showed catalytically favorable free energy barriers based on quantum mechanical/molecular mechanical (QM/MM) reaction simulations. Here, we show that atom-condensed Fukui functions can predict the reactivity from reactant conformations alone, focusing on the diene carbons involved in bond formation. The importance of the enzyme-diene interaction is supported by electric field analysis, which shows how reactivity of enzyme-substrate poses correlates with alignment of the enzyme field along the diene moiety. Our findings establish a basis for predicting and engineering Diels-Alderase activity based on electrostatic and electronic reactivity features.

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Publication Details

Journal
Chemical Communications
Published
2026-01-01
DOI
https://doi.org/10.1039/d5cc05141j
Citations
1
Primary Topic
Microbial Natural Products and Biosynthesis
Type
article
Field-Weighted Citation Impact
32.57

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article

Electric fields enhance Diels–Alderase catalysis in abyssomicin C biosynthesis

Rodrigo Recabarren, Esteban Vöhringer‐Martinez, Sam Johns, Marc van der Kamp et al.
1 citations
Chemical Communications
Microbial Natural Products and Biosynthesis
32.57
article

Electric fields enhance Diels–Alderase catalysis in abyssomicin C biosynthesis

Rodrigo Recabarren, Esteban Vöhringer‐Martinez, Sam Johns, Marc van der Kamp, H. Adrian Bunzel
article en
1 citations

Abstract

Natural Diels-Alderases catalyse [4+2] cycloadditions by preorganizing substrates into reactive conformations. However, the roles of other catalytic factors, such as electrostatic effects, remain elusive. Here, we combine conceptual density functional theory (CDFT) descriptors and electric field analysis to unravel the electrostatic basis of activity in the Diels-Alderase AbyU. Previously, four different enzyme-substrate poses were identified, of which two showed catalytically favorable free energy barriers based on quantum mechanical/molecular mechanical (QM/MM) reaction simulations. Here, we show that atom-condensed Fukui functions can predict the reactivity from reactant conformations alone, focusing on the diene carbons involved in bond formation. The importance of the enzyme-diene interaction is supported by electric field analysis, which shows how reactivity of enzyme-substrate poses correlates with alignment of the enzyme field along the diene moiety. Our findings establish a basis for predicting and engineering Diels-Alderase activity based on electrostatic and electronic reactivity features.

Chemical CommunicationsVol. 62(8)
University of Concepción (CL), University of Bristol (GB), Max Planck Institute for Terrestrial Microbiology (DE)
National Science Foundation, University of Bristol, Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung, Max-Planck-Gesellschaft, Engineering and Physical Sciences Research Council, Biotechnology and Biological Sciences Research Council
Openalex Percentile: Top 2%
Microbial Natural Products and Biosynthesis
32.57
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Electric fields enhance Diels–Alderase catalysis in abyssomicin C biosynthesis — Rodrigo Recabarren, Esteban Vöhringer‐Martinez, et al. · Chemical Communications (2026) | TGRS Research Map | TGRS