Splicing Predictions, Splicing Assays, and Variant Classification Using ACMG/AMP Guidelines: Challenges Observed with <i>BRCA1</i> and <i>BRCA2</i> Variants

Following ClinGen ENIGMA BRCA1 and BRCA2 Variant Curation Expert Panel specifications based on ACMG/AMP guidelines, we classified 4 variants as pathogenic or likely pathogenic, 10 as benign or likely benign, and 3 as uncertain significance. This comprehensive analysis of splicing defects refines the clinical classification of BRCA1 and BRCA2 variants and highlights the value of combining experimental and computational evidence to enhance genetic risk assessment in hereditary cancer.

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Publication Details

Journal
Clinical Chemistry
Published
2025-11-26
DOI
https://doi.org/10.1093/clinchem/hvaf177
Primary Topic
BRCA gene mutations in cancer
Type
article
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article

Splicing Predictions, Splicing Assays, and Variant Classification Using ACMG/AMP Guidelines: Challenges Observed with BRCA1 and BRCA2 Variants

Miguel de la Hoya, A. Vega, Victoria Sampayo, Miguel E. Aguado‐Barrera et al.
Clinical Chemistry
BRCA gene mutations in cancer
article

Splicing Predictions, Splicing Assays, and Variant Classification Using ACMG/AMP Guidelines: Challenges Observed with BRCA1 and BRCA2 Variants

Miguel de la Hoya, A. Vega, Victoria Sampayo, Miguel E. Aguado‐Barrera, Olivia Fuentes-Ríos, Ana Crujeiras-González, A.M. SÁnchez De Abajo, Ángel Carracedo, Carla Coedo-Costa, Javier Galego-Carro, Belinda Rodríguez-Lage, Marta Santamariña, Ana Blanco-Pérez
article en

Abstract

Following ClinGen ENIGMA BRCA1 and BRCA2 Variant Curation Expert Panel specifications based on ACMG/AMP guidelines, we classified 4 variants as pathogenic or likely pathogenic, 10 as benign or likely benign, and 3 as uncertain significance. This comprehensive analysis of splicing defects refines the clinical classification of BRCA1 and BRCA2 variants and highlights the value of combining experimental and computational evidence to enhance genetic risk assessment in hereditary cancer.

Clinical ChemistryVol. 72(2)
Universidade de Santiago de Compostela (ES), Hospital Universitario Insular de Gran Canaria (ES), Complejo Hospitalario Universitario de Santiago (ES), Instituto de Investigación Sanitaria del Hospital Clínico San Carlos (ES), Center for Research in Molecular Medicine and Chronic Diseases (ES), Fundación Pública Galega de Medicina Xenómica (ES), Instituto de Investigación Sanitaria de Santiago (ES), Instituto de Investigación de Enfermedades Raras (ES)
Openalex Percentile: Top 23%
BRCA gene mutations in cancer
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