Time-resolved multiomics profiling reveals chromatin O-GlcNAc modification promotes senescence-associated transcriptional program
O-GlcNAc modification is a key cellular signal, but its role in regulating senescence-associated transcription remains poorly understood. Here, we apply a time-resolved chemical genomics strategy to map dynamic O-GlcNAc chromatin-associated proteins (OCPs) during oncogene-induced senescence (OIS) in primary human fibroblasts. Chromatin O-GlcNAc modification continues to accumulate, while 1,987 senescence-associated OCPs undergo dynamic shifts in genomic occupancy across diverse epigenetic chromatin states and display bimodal regulatory activities within the 3,466-gene senescence transcriptome. O-GlcNAc facilitates the formation of dual-function complexes: TF-SWI/SNF activates senescence-associated secretory phenotype (SASP) genes at promoters, whereas NuRD enforces the repression of cell-cycle regulators at enhancers. Furthermore, we identify O-GlcNAc modified JUN and GATAD2A as key regulators of OIS phenotypes in both in vitro and in vivo models of senescence-driven tumorigenesis. These findings reveal dynamic regulation and chromatin organization principles of O-GlcNAc-related epigenetic factors, providing insights into cellular senescence and potential therapeutic strategies.
Authors
- Sijin Wu (ORCID: https://orcid.org/0000-0003-4554-4610)
- Kairan Yu (ORCID: https://orcid.org/0009-0005-8571-3804)
- Dong Qian (ORCID: https://orcid.org/0000-0002-6213-9791)
- Qianmei Chen
- Yajie Liu (ORCID: https://orcid.org/0000-0003-4629-0640)
- Huang Huang (ORCID: https://orcid.org/0000-0002-8377-4823)
- Jiawei Wu (ORCID: https://orcid.org/0009-0008-3139-8273)
- Xuechen Li (ORCID: https://orcid.org/0000-0003-3920-4329)
- Keren Zhang (ORCID: https://orcid.org/0000-0003-4215-4449)
- Jianing Zhang
- Xiaomin Zhong
- Yan Ren
- Yubo Liu
- Wei Wang
- Ran Zhao
- Nana Zhang
- Fanxu Meng
- Lirui Han
Institutions
- Dalian University of Technology (CN)
- Southern University of Science and Technology (CN)
- Dalian University (CN)
- Huaian First People’s Hospital (CN)
- Shanghai University of Traditional Chinese Medicine (CN)
- Shenzhen Institute of Building Research (China) (CN)
- State Key Laboratory of Synthetic Chemistry (CN)
- Liaoning Cancer Hospital & Institute (CN)
- Xi’an Jiaotong-Liverpool University (CN)
- Nanjing Medical University (CN)
- University of Hong Kong (HK)
- Northeastern University (CN)
Publication Details
- Journal
- Nature Communications
- Published
- 2026-01-08
- DOI
- https://doi.org/10.1038/s41467-025-68143-z
- Primary Topic
- Genomics and Chromatin Dynamics
- Type
- article
- Field-Weighted Citation Impact
- 0.00