An autonomous agentic workflow for clinical detection of cognitive concerns using large language models

Early detection of cognitive impairment is limited by traditional screening tools and resource constraints. We developed two large language model workflows for identifying cognitive concerns from clinical notes: (1) an expert-driven workflow with iterative prompt refinement across three LLMs (LLaMA 3.1 8B, LLaMA 3.2 3B, Med42 v2 8B), and (2) an autonomous agentic workflow coordinating five specialized agents for prompt optimization. Using Llama3.1, we optimized on a balanced refinement dataset and validated on an independent dataset reflecting real-world prevalence. The agentic workflow achieved comparable validation performance (F1 = 0.74 vs. 0.81) and superior refinement results (0.93 vs. 0.87) relative to the expert-driven workflow. Sensitivity decreased from 0.91 to 0.62 between datasets, demonstrating the impact of prevalence shift on generalizability. Expert re-adjudication revealed 44% of apparent false negatives reflected clinically appropriate reasoning. These findings demonstrate that autonomous agentic systems can approach expert-level performance while maintaining interpretability, offering scalable clinical decision supports.

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Publication Details

Journal
npj Digital Medicine
Published
2026-01-07
DOI
https://doi.org/10.1038/s41746-025-02324-4
Citations
1
Primary Topic
Artificial Intelligence in Healthcare and Education
Type
article
Field-Weighted Citation Impact
17.70

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article

An autonomous agentic workflow for clinical detection of cognitive concerns using large language models

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1 citations
npj Digital Medicine
Artificial Intelligence in Healthcare and Education
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article

An autonomous agentic workflow for clinical detection of cognitive concerns using large language models

Hossein Estiri, Deborah Blacker, Rebeka Bustamante Rocha, S. Murphy, Neguine Rezaii, Valdery Moura, Jennifer S. Haas, Chirag J. Patel, Jiazi Tian, Pedram Fard, Liqin Wang, Cameron Cagan, Lidia M.V.R. Moura
article en
1 citations

Abstract

Early detection of cognitive impairment is limited by traditional screening tools and resource constraints. We developed two large language model workflows for identifying cognitive concerns from clinical notes: (1) an expert-driven workflow with iterative prompt refinement across three LLMs (LLaMA 3.1 8B, LLaMA 3.2 3B, Med42 v2 8B), and (2) an autonomous agentic workflow coordinating five specialized agents for prompt optimization. Using Llama3.1, we optimized on a balanced refinement dataset and validated on an independent dataset reflecting real-world prevalence. The agentic workflow achieved comparable validation performance (F1 = 0.74 vs. 0.81) and superior refinement results (0.93 vs. 0.87) relative to the expert-driven workflow. Sensitivity decreased from 0.91 to 0.62 between datasets, demonstrating the impact of prevalence shift on generalizability. Expert re-adjudication revealed 44% of apparent false negatives reflected clinically appropriate reasoning. These findings demonstrate that autonomous agentic systems can approach expert-level performance while maintaining interpretability, offering scalable clinical decision supports.

npj Digital MedicineVol. 9(1)
Brigham and Women's Hospital (US), Harvard University (US), Massachusetts General Hospital (US)
National Institutes of Health, National Institute of Allergy and Infectious Diseases
Openalex Percentile: Top 3%
Artificial Intelligence in Healthcare and Education
17.70
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