The complete chloroplast genome and phylogenetic analysis of <i>Fraxinus paxiana</i> Lingelsh. 1907 (Oleaceae)

<i>Fraxinus paxiana</i> distributed in Shaanxi, Gansu, Hubei, Hunan, and Sichuan provinces<i>,</i> is used as a local medicine in Shaanxi and also serves as an adulterant of traditional Chinese medicine Qinpi. Here, we assembled its 155,692 bp chloroplast genome (GC content 37.87%) with a typical quadripartite structure. A total of 133 genes were annotated, including 88 protein-coding genes, 37 tRNA genes, and eight rRNA genes. We identified 43 SSRs, predominantly composed of mononucleotide repeats. Phylogenetic analysis showed that the genus <i>Fraxinus</i> is divided into two branches, with <i>F. paxiana</i> and <i>F. insularis</i> having the closest phylogenetic relationship.

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Journal
Mitochondrial DNA Part B
Published
2026-01-05
DOI
https://doi.org/10.1080/23802359.2025.2573760
Primary Topic
Genomics and Phylogenetic Studies
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article
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article

The complete chloroplast genome and phylogenetic analysis of Fraxinus paxiana Lingelsh. 1907 (Oleaceae)

Hong Xin Feng, XiangXiao Meng, Shilin Chen, Wei Sun
Mitochondrial DNA Part B
Genomics and Phylogenetic Studies
article

The complete chloroplast genome and phylogenetic analysis of Fraxinus paxiana Lingelsh. 1907 (Oleaceae)

Hong Xin Feng, XiangXiao Meng, Shilin Chen, Wei Sun
article en

Abstract

<i>Fraxinus paxiana</i> distributed in Shaanxi, Gansu, Hubei, Hunan, and Sichuan provinces<i>,</i> is used as a local medicine in Shaanxi and also serves as an adulterant of traditional Chinese medicine Qinpi. Here, we assembled its 155,692 bp chloroplast genome (GC content 37.87%) with a typical quadripartite structure. A total of 133 genes were annotated, including 88 protein-coding genes, 37 tRNA genes, and eight rRNA genes. We identified 43 SSRs, predominantly composed of mononucleotide repeats. Phylogenetic analysis showed that the genus <i>Fraxinus</i> is divided into two branches, with <i>F. paxiana</i> and <i>F. insularis</i> having the closest phylogenetic relationship.

Mitochondrial DNA Part BVol. 11(2)
Tianjin University of Traditional Chinese Medicine (CN), Chinese Academy of Medical Sciences & Peking Union Medical College (CN), China Academy of Chinese Medical Sciences (CN), Chengdu University of Traditional Chinese Medicine (CN)
Openalex Percentile: Top 97%
Genomics and Phylogenetic Studies
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The complete chloroplast genome and phylogenetic analysis of <i>Fraxinus paxiana</i> Lingelsh. 1907 (Oleaceae) — Hong Xin Feng, XiangXiao Meng, et al. · Mitochondrial DNA Part B (2026) | TGRS Research Map | TGRS