Comprehensive Investigation of GRF Transcription Factors and Associated Responses to Drought Stress in Oat (Avena sativa)

Growth-regulating factors (GRFs) are plant-specific transcription factors that play important roles in plant growth and development. However, no systematic analysis of <i>GRF</i> genes has been reported in oat (<i>Avena sativa</i>). In this study, we conducted a comprehensive characterization of the <i>GRF</i> gene family in oat, including their physicochemical properties, chromosomal distribution, phylogenetic relationships, gene structure, conserved domains, promoter <i>cis</i>-elements, duplication events, and drought-responsive expression. In total, 28 <i>GRF</i> genes were identified in oat. Phylogenetic analysis classified them into two main groups, which could be further subdivided into five subgroups. Gene structure and conserved motif analyses revealed that <i>AsGRF</i> genes are largely group-specific and relatively highly conserved within each subgroup. Segmental duplication has been the primary driver of <i>AsGRF</i> gene family expansion, and these genes have undergone strong purifying selection during evolution. Transcriptomic analysis identified 13 <i>AsGRF</i> genes expressed under drought stress. Subsequent qRT-PCR analysis revealed that six of these genes were significantly up-regulated. Notably, <i>AsGRF3</i> showed the highest expression level, was localized to the nucleus, and lacked transcriptional self-activation activity. In conclusion, this study provides a comprehensive analysis of the <i>AsGRF</i> gene family and serves as a valuable reference for further functional characterization of these genes in drought stress responses in oat.

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Journal
Plants
Published
2026-01-05
DOI
https://doi.org/10.3390/plants15010160
Primary Topic
Plant Molecular Biology Research
Type
article
Field-Weighted Citation Impact
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article

Comprehensive Investigation of GRF Transcription Factors and Associated Responses to Drought Stress in Oat (Avena sativa)

MA Mingchuan, L. LIU, Guoqiang Zhang, Zhang Liu et al.
Plants
Plant Molecular Biology Research
article

Comprehensive Investigation of GRF Transcription Factors and Associated Responses to Drought Stress in Oat (Avena sativa)

MA Mingchuan, L. LIU, Guoqiang Zhang, Zhang Liu, Shirui Xu, Xiajie Ji, Fumeng Sai
article en

Abstract

Growth-regulating factors (GRFs) are plant-specific transcription factors that play important roles in plant growth and development. However, no systematic analysis of <i>GRF</i> genes has been reported in oat (<i>Avena sativa</i>). In this study, we conducted a comprehensive characterization of the <i>GRF</i> gene family in oat, including their physicochemical properties, chromosomal distribution, phylogenetic relationships, gene structure, conserved domains, promoter <i>cis</i>-elements, duplication events, and drought-responsive expression. In total, 28 <i>GRF</i> genes were identified in oat. Phylogenetic analysis classified them into two main groups, which could be further subdivided into five subgroups. Gene structure and conserved motif analyses revealed that <i>AsGRF</i> genes are largely group-specific and relatively highly conserved within each subgroup. Segmental duplication has been the primary driver of <i>AsGRF</i> gene family expansion, and these genes have undergone strong purifying selection during evolution. Transcriptomic analysis identified 13 <i>AsGRF</i> genes expressed under drought stress. Subsequent qRT-PCR analysis revealed that six of these genes were significantly up-regulated. Notably, <i>AsGRF3</i> showed the highest expression level, was localized to the nucleus, and lacked transcriptional self-activation activity. In conclusion, this study provides a comprehensive analysis of the <i>AsGRF</i> gene family and serves as a valuable reference for further functional characterization of these genes in drought stress responses in oat.

PlantsVol. 15(1)
Shanxi Agricultural University (CN), Shanxi Academy of Building Research (CN), Hebei Academy of Agriculture and Forestry Sciences (CN)
Shanxi Agricultural University
Openalex Percentile: Top 97%
Plant Molecular Biology Research
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