Integrated experimental and computational workflows for single-cell transcriptomics in plants

Our study establishes optimized experimental and computational workflows for plant single-cell transcriptomics. By validating input comparability and addressing the limitations of nuclear data, we provide methodological guidance that extends beyond maize and supports future single-cell investigations across diverse plant species.

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Publication Details

Journal
Plant Methods
Published
2026-01-03
DOI
https://doi.org/10.1186/s13007-025-01490-6
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
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article

Integrated experimental and computational workflows for single-cell transcriptomics in plants

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Plant Methods
Single-cell and spatial transcriptomics
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Integrated experimental and computational workflows for single-cell transcriptomics in plants

Yabing Zhu, Yuan Jiang, Bojie Lu, Liang Zong, shanqiao zheng, Jing Wang, Peng Liu, Qun Liu, Sanjie Jiang, Song Gao, Peng Yu
article en

Abstract

Our study establishes optimized experimental and computational workflows for plant single-cell transcriptomics. By validating input comparability and addressing the limitations of nuclear data, we provide methodological guidance that extends beyond maize and supports future single-cell investigations across diverse plant species.

Plant MethodsVol. 22(1)
BGI Group (China) (CN), Botswana Geoscience Institute (BW), Technical University of Munich (DE)
Zero hunger
Openalex Percentile: Top 98%
Single-cell and spatial transcriptomics
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