Unlocking natural history collections to improve eDNA reference databases and biodiversity monitoring.

Biodiversity changes due to human activities highlight the need for efficient biodiversity monitoring approaches. Environmental DNA (eDNA) metabarcoding offers a noninvasive method used for biodiversity monitoring and ecosystem assessment, but its accuracy depends on comprehensive DNA reference databases. Natural history collections often contain rare or difficult-to-obtain samples that can serve as a valuable resource to fill gaps in eDNA reference databases. In the present article, we discuss the utility of specimens from natural history collections in supporting future eDNA applications. Museomics-the application of -omics techniques to museum specimens-offers a promising avenue for improving eDNA reference databases by increasing species coverage. Furthermore, museomics can provide transferable methodological advancements for extracting genetic material from samples with low and degraded DNA. The integration of natural history collections, museomics, and eDNA approaches has the potential to significantly improve our understanding of global biodiversity, highlighting the continued importance of natural history collections.

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Publication Details

Journal
Open Access CRIS of the University of Bern
Published
2025-12-01
DOI
https://doi.org/10.48620/93498
Primary Topic
Environmental DNA in Biodiversity Studies
Type
article
Field-Weighted Citation Impact
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article

Unlocking natural history collections to improve eDNA reference databases and biodiversity monitoring.

Loïc Pellissier, Annamaria Nocita, Michael Matschiner, Nicolas Straube et al.
Open Access CRIS of the University of Bern
Environmental DNA in Biodiversity Studies
article

Unlocking natural history collections to improve eDNA reference databases and biodiversity monitoring.

Loïc Pellissier, Annamaria Nocita, Michael Matschiner, Nicolas Straube, Anja Palandačić, Sarah Schmid, Nadir Alvarez, Moritz Sonnewald, Peter Rask Møller, Camille Albouy, Stéphanie Manel, Bo Delling, Lukas Rüber, James Maclaine
article en

Abstract

Biodiversity changes due to human activities highlight the need for efficient biodiversity monitoring approaches. Environmental DNA (eDNA) metabarcoding offers a noninvasive method used for biodiversity monitoring and ecosystem assessment, but its accuracy depends on comprehensive DNA reference databases. Natural history collections often contain rare or difficult-to-obtain samples that can serve as a valuable resource to fill gaps in eDNA reference databases. In the present article, we discuss the utility of specimens from natural history collections in supporting future eDNA applications. Museomics-the application of -omics techniques to museum specimens-offers a promising avenue for improving eDNA reference databases by increasing species coverage. Furthermore, museomics can provide transferable methodological advancements for extracting genetic material from samples with low and degraded DNA. The integration of natural history collections, museomics, and eDNA approaches has the potential to significantly improve our understanding of global biodiversity, highlighting the continued importance of natural history collections.

Open Access CRIS of the University of Bern
Ecologie & Evolution (FR)
Life in Land
Openalex Percentile: Top 28%
Environmental DNA in Biodiversity Studies
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