Molecular Mechanisms of DBNL in Heart Failure: From Macrophage Immunometabolism to Therapeutic Implications

Heart failure (HF) remains a major global health challenge, with limited effective treatments targeting its core pathophysiological mechanisms. In this study, an integrated multiomics approach combining Mendelian randomization (MR) and single-cell RNA sequencing (scRNA-seq) was used to identify potential biomarkers and therapeutic targets for HF. We utilized data from genome-wide association studies (GWASs), expression quantitative trait loci (eQTLs), methylation quantitative trait loci (mQTLs), and protein quantitative trait loci (pQTLs) to investigate the genetic mechanisms of HF. Single-cell RNA sequencing was performed to analyse gene expression in cardiac macrophages, and pseudotime analysis was used to study the dynamic regulation of DBNL during macrophage differentiation. Molecular docking and dynamics simulations identified pirinixic acid (WY-14643; PubChem CID: 4594; synonyms: 50892-23-4; WY-14643) as a potential regulator of DBNL. Multiomics analysis revealed that DBNL (Drebrin-like) is a key gene associated with HF risk. Single-cell RNA sequencing revealed that DBNL is expressed mainly in cardiac macrophages and is upregulated under pathological conditions. The expression of DBNL by macrophages is associated with immune metabolism and profibrotic pathways, particularly the IL-6/JAK/STAT3, PI3K/AKT/mTOR, and TGF-β signalling pathways. Pseudotime analysis indicated that DBNL has a dynamic regulatory effect on macrophage differentiation, especially in chronic inflammation. Molecular docking and dynamic simulations have shown that pyridine acid has a potential role in regulating DBNL. This study elucidates the role of DBNL in the progression of heart failure and suggests its potential as a therapeutic target. Importantly, the therapeutic relevance is inferred from computational predictions. These findings offer novel insights into immune metabolism and macrophage-mediated intercellular communication, establishing a theoretical basis for future applications in the optimization of DBNL-targeted drugs and functional research. Nonetheless, additional experimental validation and preclinical studies are needed to substantiate the clinical efficacy of DBNL as a therapeutic target.

Authors

Institutions

Publication Details

Journal
Journal of Visualized Experiments
Published
2026-01-02
DOI
https://doi.org/10.3791/69756
Primary Topic
Cardiac Fibrosis and Remodeling
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Molecular Mechanisms of DBNL in Heart Failure: From Macrophage Immunometabolism to Therapeutic Implications

Li Cui, Xiaomin Chen, Zehao Zhao, Binbin Cao et al.
Journal of Visualized Experiments
Cardiac Fibrosis and Remodeling
article

Molecular Mechanisms of DBNL in Heart Failure: From Macrophage Immunometabolism to Therapeutic Implications

Li Cui, Xiaomin Chen, Zehao Zhao, Binbin Cao, Jiahui Li, Jia Su
article en

Abstract

Heart failure (HF) remains a major global health challenge, with limited effective treatments targeting its core pathophysiological mechanisms. In this study, an integrated multiomics approach combining Mendelian randomization (MR) and single-cell RNA sequencing (scRNA-seq) was used to identify potential biomarkers and therapeutic targets for HF. We utilized data from genome-wide association studies (GWASs), expression quantitative trait loci (eQTLs), methylation quantitative trait loci (mQTLs), and protein quantitative trait loci (pQTLs) to investigate the genetic mechanisms of HF. Single-cell RNA sequencing was performed to analyse gene expression in cardiac macrophages, and pseudotime analysis was used to study the dynamic regulation of DBNL during macrophage differentiation. Molecular docking and dynamics simulations identified pirinixic acid (WY-14643; PubChem CID: 4594; synonyms: 50892-23-4; WY-14643) as a potential regulator of DBNL. Multiomics analysis revealed that DBNL (Drebrin-like) is a key gene associated with HF risk. Single-cell RNA sequencing revealed that DBNL is expressed mainly in cardiac macrophages and is upregulated under pathological conditions. The expression of DBNL by macrophages is associated with immune metabolism and profibrotic pathways, particularly the IL-6/JAK/STAT3, PI3K/AKT/mTOR, and TGF-β signalling pathways. Pseudotime analysis indicated that DBNL has a dynamic regulatory effect on macrophage differentiation, especially in chronic inflammation. Molecular docking and dynamic simulations have shown that pyridine acid has a potential role in regulating DBNL. This study elucidates the role of DBNL in the progression of heart failure and suggests its potential as a therapeutic target. Importantly, the therapeutic relevance is inferred from computational predictions. These findings offer novel insights into immune metabolism and macrophage-mediated intercellular communication, establishing a theoretical basis for future applications in the optimization of DBNL-targeted drugs and functional research. Nonetheless, additional experimental validation and preclinical studies are needed to substantiate the clinical efficacy of DBNL as a therapeutic target.

Journal of Visualized Experiments(227)
Ningbo University Affiliated Hospital (CN), Second Affiliated Hospital of Zhejiang University (CN), Ningbo First Hospital (CN)
Good health and well-being
Openalex Percentile: Top 98%
Cardiac Fibrosis and Remodeling
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.