Overcoming Pitfalls in Graph Contrastive Learning Evaluation: Toward Comprehensive Benchmarks

The rise of self-supervised learning(SSL), which operates without the need for labeled data, has garnered significant interest within the graph learning community. This enthusiasm has led to the development of numerous self-supervised learning methods, such as Graph Contrastive Learning (GCL) techniques, all aiming to create a versatile graph encoder that leverages the wealth of unlabeled data for various downstream tasks. However, the current evaluation standards for GCL approaches are flawed due to the need for extensive hyper-parameter tuning during pre-training and the reliance on a single downstream task for assessment. These flaws can skew the evaluation away from the intended goals, potentially leading to misleading conclusions. In our paper, we thoroughly examine these shortcomings and o!er fresh perspectives on how GCL methods are a!ected by hyperparameter choices and the choice of downstream tasks for their evaluation. Additionally, we introduce an enhanced evaluation framework designed to more accurately gauge the e!ectiveness, consistency, and overall capability of GCL methods. Our code implementation is available to ease reproducibility on https://github.com/GraphTL-Bench/BGPM.

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Publication Details

Journal
ACM SIGKDD Explorations Newsletter
Published
2025-12-30
DOI
https://doi.org/10.1145/3787470.3787479
Primary Topic
Advanced Graph Neural Networks
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article
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article

Overcoming Pitfalls in Graph Contrastive Learning Evaluation: Toward Comprehensive Benchmarks

Hongliang Chi, Philip S. Yu, H. Zhang, Zhiwei Zhang et al.
ACM SIGKDD Explorations Newsletter
Advanced Graph Neural Networks
article

Overcoming Pitfalls in Graph Contrastive Learning Evaluation: Toward Comprehensive Benchmarks

Hongliang Chi, Philip S. Yu, H. Zhang, Zhiwei Zhang, Lu Cheng, Suhang Wang, Kay Liu, Yao Ma, Qian Ma
article en

Abstract

The rise of self-supervised learning(SSL), which operates without the need for labeled data, has garnered significant interest within the graph learning community. This enthusiasm has led to the development of numerous self-supervised learning methods, such as Graph Contrastive Learning (GCL) techniques, all aiming to create a versatile graph encoder that leverages the wealth of unlabeled data for various downstream tasks. However, the current evaluation standards for GCL approaches are flawed due to the need for extensive hyper-parameter tuning during pre-training and the reliance on a single downstream task for assessment. These flaws can skew the evaluation away from the intended goals, potentially leading to misleading conclusions. In our paper, we thoroughly examine these shortcomings and o!er fresh perspectives on how GCL methods are a!ected by hyperparameter choices and the choice of downstream tasks for their evaluation. Additionally, we introduce an enhanced evaluation framework designed to more accurately gauge the e!ectiveness, consistency, and overall capability of GCL methods. Our code implementation is available to ease reproducibility on https://github.com/GraphTL-Bench/BGPM.

ACM SIGKDD Explorations NewsletterVol. 27(2)
Pennsylvania State University (US), Rensselaer Polytechnic Institute (US), University of Illinois Chicago (US)
Openalex Percentile: Top 17%
Advanced Graph Neural Networks
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Overcoming Pitfalls in Graph Contrastive Learning Evaluation: Toward Comprehensive Benchmarks — Hongliang Chi, Philip S. Yu, et al. · ACM SIGKDD Explorations Newsletter (2025) | TGRS Research Map | TGRS