Distinct decomposition dynamics of heterogeneous carbon components in cultivated agricultural soils controlled by flexible microbial substrate utilization strategy

• Plant debris dominates SOC mineralization, and microbial necromass controls stability. • A shift from bacteria to fungi drives carbohydrates-to-lignin decomposition in C-rich soil. • Actinomycetes dominate lignin and carbohydrates co-metabolism in C-starved habitats. • Flexible substrate utilization strategy regulates the decomposition of heterogeneous SOC components. Improving soil organic matter (SOM) maintenance is crucial for terrestrial carbon (C) sequestration and ecosystem functioning. Conservation tillage favors SOM pool buildup; however, it remains unclear how the decomposition of heterogeneous components is manipulated by microbial substrate utilization strategy from the view of SOM stability. Here, a one-year microcosm incubation was conducted using surface soils developed under 12 years of conservation tillage (high-C soil) and maize residue removal (low-C soil). Temporal changes in lignin phenols, neutral sugars, and amino sugars in the soil were monitored along with microbial phospholipid fatty acids (PLFAs) and enzyme activities. Throughout incubation, lignin phenols declined more (20.8-26.3%) than the SOM (12.3-14.5%) and amino sugars (10.6-12.3%), highlighting the key role of plant debris in SOM mineralization, and complementarily, the greater contribution of microbial necromass to SOM stabilization. Moreover, the decomposition dynamics of neutral sugars and lignin were strongly influenced by C availability. In the low-C soil, these two types of compounds decomposed with similar temporal patterns and extents, and such substrate co-metabolism was dominantly mediated by actinomycetes. In contrast, in the high-C soil, a lower oxidases-to-carbohydrolases ratio regulated the sequential decomposition of labile neutral sugars followed by recalcitrant lignin. Such microbial substrate selectivity was associated with a shift in microbial community from bacterial dominance toward increased fungal contribution. Overall, our findings underscore the significant interplay between soil C availability and flexible microbial substrate utilization strategy in regulating decomposition of heterogeneous SOM components, as well as their distinct contributions in SOM turnover and stabilization.

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Publication Details

Journal
Journal of Integrative Agriculture
Published
2025-12-01
DOI
https://doi.org/10.1016/j.jia.2025.12.063
Primary Topic
Soil Carbon and Nitrogen Dynamics
Type
article
Field-Weighted Citation Impact
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article

Distinct decomposition dynamics of heterogeneous carbon components in cultivated agricultural soils controlled by flexible microbial substrate utilization strategy

Kaikai Min, Hongbo He, Wei Zhang, Yuzhu Li et al.
Journal of Integrative Agriculture
Soil Carbon and Nitrogen Dynamics
article

Distinct decomposition dynamics of heterogeneous carbon components in cultivated agricultural soils controlled by flexible microbial substrate utilization strategy

Kaikai Min, Hongbo He, Wei Zhang, Yuzhu Li, Wanqi Wang, Yan Liu, Xuefeng Zhu, Shuhan Dong, Huijie Lü, Xudong Zhang
article en

Abstract

• Plant debris dominates SOC mineralization, and microbial necromass controls stability. • A shift from bacteria to fungi drives carbohydrates-to-lignin decomposition in C-rich soil. • Actinomycetes dominate lignin and carbohydrates co-metabolism in C-starved habitats. • Flexible substrate utilization strategy regulates the decomposition of heterogeneous SOC components. Improving soil organic matter (SOM) maintenance is crucial for terrestrial carbon (C) sequestration and ecosystem functioning. Conservation tillage favors SOM pool buildup; however, it remains unclear how the decomposition of heterogeneous components is manipulated by microbial substrate utilization strategy from the view of SOM stability. Here, a one-year microcosm incubation was conducted using surface soils developed under 12 years of conservation tillage (high-C soil) and maize residue removal (low-C soil). Temporal changes in lignin phenols, neutral sugars, and amino sugars in the soil were monitored along with microbial phospholipid fatty acids (PLFAs) and enzyme activities. Throughout incubation, lignin phenols declined more (20.8-26.3%) than the SOM (12.3-14.5%) and amino sugars (10.6-12.3%), highlighting the key role of plant debris in SOM mineralization, and complementarily, the greater contribution of microbial necromass to SOM stabilization. Moreover, the decomposition dynamics of neutral sugars and lignin were strongly influenced by C availability. In the low-C soil, these two types of compounds decomposed with similar temporal patterns and extents, and such substrate co-metabolism was dominantly mediated by actinomycetes. In contrast, in the high-C soil, a lower oxidases-to-carbohydrolases ratio regulated the sequential decomposition of labile neutral sugars followed by recalcitrant lignin. Such microbial substrate selectivity was associated with a shift in microbial community from bacterial dominance toward increased fungal contribution. Overall, our findings underscore the significant interplay between soil C availability and flexible microbial substrate utilization strategy in regulating decomposition of heterogeneous SOM components, as well as their distinct contributions in SOM turnover and stabilization.

Journal of Integrative Agriculture
Shenyang Ligong University (CN), Chinese Academy of Sciences (CN), Institute of Applied Ecology (CN), University of Chinese Academy of Sciences (CN)
Life in Land
Openalex Percentile: Top 32%
Soil Carbon and Nitrogen Dynamics
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