<i>Clostridioides difficile</i> in equidae necropsied in Northwestern France, between 2019 and 2021

<i>Clostridioides difficile,</i> an anaerobic, spore-forming enteropathogen, is less studied in animals than in humans despite its importance in One Health. We evaluated <i>C. difficile</i> occurrence, diversity, circulation, and virulence in French Equidae (<i>n</i> = 100) after their necropsy in northwestern France, from 2019 to 2021. We systematically recovered all cecal contents and any watery intestinal contents. We isolated <i>C. difficile</i> strains, determined their toxin gene profile by PCR, and established their PCR-ribotype according to the WEBRIBO database. We also performed free toxin detection. Twenty-seven Equidae were positive for <i>C. difficile</i> and 20 had a toxigenic strain, including one animal co-colonized by a non-toxigenic strain. Toxigenic isolates belonged to eight already described ribotypes: (i) 078 and 126 (toxin genes of wild-type size: <i>tcdA<sup>+</sup> tcdB<sup>+</sup> cdt<sup>+</sup></i>), (ii) 005, 012, 020, AI-53, and FR227 (<i>tcdA<sup>+</sup> tcdB<sup>+</sup></i>), and (iii) 017 (<i>tcdB<sup>+</sup></i>). Non-toxigenic isolates were of ribotypes 009, 035, and 439. Ribotypes 017 and 009 were predominant (<i>n</i> = 5). In two cases, Equidae of the same premises shared the same ribotype, either 020 or 009. Free toxins were detected in four animals: they displayed signs of diarrhea and a <i>C. difficile</i> of ribotype 126 (<i>n</i> = 1) or 017 (<i>n</i> = 3) as the only detected enteropathogen, suggesting a <i>C. difficile</i> infection (CDI). Three of them had received antibiotics. Two had died from an entero-toxic infection, for which <i>C. difficile</i> ribotype 017 was the only identified cause. French Equidae displayed common pathogenic <i>C. difficile,</i> and ribotype 017 was highly virulent. These findings are of concern from a One Health perspective.IMPORTANCE<i>C. difficile</i>, a major enteropathogen widely disseminated in the environment, is a One Health issue. Animals are raising concern as human contamination sources. Equidae are in close contact with humans and also develop <i>post</i>-antibiotic and healthcare-associated CDIs. The systematic survey of Equidae necropsied from 2019 to 2021 in the leading horse breeding region in France revealed that 20% harbored pathogenic strains. These belonged to clinically important ribotypes, raising the possibility of cross-species, zoonotic or anthropo-zoonotic transmission. Free toxins, which are rarely tested in animals, were detected in four animals with signs of diarrhea and a toxigenic <i>C. difficile</i> as the only identified enteropathogen, suggesting CDI. In two of them, <i>C. difficile</i> ribotype 017 was the only identified cause of entero-toxic disease and death. French Equidae could play a role in the dissemination of pathogenic <i>C. difficile</i> and notably ribotype 017. They should be surveilled carefully from a One Health perspective.

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Journal
Microbiology Spectrum
Published
2025-12-30
DOI
https://doi.org/10.1128/spectrum.02165-25
Primary Topic
Clostridium difficile and Clostridium perfringens research
Type
article
Field-Weighted Citation Impact
0.00

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article

Clostridioides difficile in equidae necropsied in Northwestern France, between 2019 and 2021

Fabien Duquesne, Sofia Kozak, Nathalie Foucher, Maud Bernez-Romand et al.
Microbiology Spectrum
Clostridium difficile and Clostridium perfringens research
article

Clostridioides difficile in equidae necropsied in Northwestern France, between 2019 and 2021

Fabien Duquesne, Sofia Kozak, Nathalie Foucher, Maud Bernez-Romand, Jackie Tapprest, Isabelle Poquet, Sandrine Pétry, Karine Maillard, Ludovic Bridoux, Frédéric Barbut
article en

Abstract

<i>Clostridioides difficile,</i> an anaerobic, spore-forming enteropathogen, is less studied in animals than in humans despite its importance in One Health. We evaluated <i>C. difficile</i> occurrence, diversity, circulation, and virulence in French Equidae (<i>n</i> = 100) after their necropsy in northwestern France, from 2019 to 2021. We systematically recovered all cecal contents and any watery intestinal contents. We isolated <i>C. difficile</i> strains, determined their toxin gene profile by PCR, and established their PCR-ribotype according to the WEBRIBO database. We also performed free toxin detection. Twenty-seven Equidae were positive for <i>C. difficile</i> and 20 had a toxigenic strain, including one animal co-colonized by a non-toxigenic strain. Toxigenic isolates belonged to eight already described ribotypes: (i) 078 and 126 (toxin genes of wild-type size: <i>tcdA<sup>+</sup> tcdB<sup>+</sup> cdt<sup>+</sup></i>), (ii) 005, 012, 020, AI-53, and FR227 (<i>tcdA<sup>+</sup> tcdB<sup>+</sup></i>), and (iii) 017 (<i>tcdB<sup>+</sup></i>). Non-toxigenic isolates were of ribotypes 009, 035, and 439. Ribotypes 017 and 009 were predominant (<i>n</i> = 5). In two cases, Equidae of the same premises shared the same ribotype, either 020 or 009. Free toxins were detected in four animals: they displayed signs of diarrhea and a <i>C. difficile</i> of ribotype 126 (<i>n</i> = 1) or 017 (<i>n</i> = 3) as the only detected enteropathogen, suggesting a <i>C. difficile</i> infection (CDI). Three of them had received antibiotics. Two had died from an entero-toxic infection, for which <i>C. difficile</i> ribotype 017 was the only identified cause. French Equidae displayed common pathogenic <i>C. difficile,</i> and ribotype 017 was highly virulent. These findings are of concern from a One Health perspective.IMPORTANCE<i>C. difficile</i>, a major enteropathogen widely disseminated in the environment, is a One Health issue. Animals are raising concern as human contamination sources. Equidae are in close contact with humans and also develop <i>post</i>-antibiotic and healthcare-associated CDIs. The systematic survey of Equidae necropsied from 2019 to 2021 in the leading horse breeding region in France revealed that 20% harbored pathogenic strains. These belonged to clinically important ribotypes, raising the possibility of cross-species, zoonotic or anthropo-zoonotic transmission. Free toxins, which are rarely tested in animals, were detected in four animals with signs of diarrhea and a toxigenic <i>C. difficile</i> as the only identified enteropathogen, suggesting CDI. In two of them, <i>C. difficile</i> ribotype 017 was the only identified cause of entero-toxic disease and death. French Equidae could play a role in the dissemination of pathogenic <i>C. difficile</i> and notably ribotype 017. They should be surveilled carefully from a One Health perspective.

Microbiology SpectrumVol. 14(2)
Inserm (FR), Université Paris Cité (FR), AgroParisTech (FR), Université Paris-Saclay (FR), Microbiologie de l’alimentation au service de la santé (FR), Sorbonne Université (FR), Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (FR), Sorbonne Paris Cité (FR), Assistance Publique – Hôpitaux de Paris (FR), Hôpital Saint-Antoine (FR), Center for Epidemiology and Animal Health (US)
Agence Nationale de Sécurité Sanitaire de l’Alimentation, de l’Environnement et du Travail, Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement
Openalex Percentile: Top 30%
Clostridium difficile and Clostridium perfringens research
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