A Hybrid Vision Transformer-BiRNN Architecture for Direct k-Space to Image Reconstruction in Accelerated MRI

Long scan times remain a fundamental challenge in Magnetic Resonance Imaging (MRI). Accelerated MRI, which undersamples k-space, requires robust reconstruction methods to solve the ill-posed inverse problem. Recent methods have shown promise by processing image-domain features to capture global spatial context. However, these approaches are often limited, as they fail to fully leverage the unique, sequential characteristics of the k-space data themselves, which are critical for disentangling aliasing artifacts. This study introduces a novel, hybrid, dual-domain deep learning architecture that combines a ViT-based autoencoder with Bidirectional Recurrent Neural Networks (BiRNNs). The proposed architecture is designed to synergistically process information from both domains: it uses the ViT to learn features from image patches and the BiRNNs to model sequential dependencies directly from k-space data. We conducted a comprehensive comparative analysis against a standard ViT with only an MLP head (Model 1), a ViT autoencoder operating solely in the image domain (Model 2), and a competitive UNet baseline. Evaluations were performed on retrospectively undersampled neuro-MRI data using R = 4 and R = 8 acceleration factors with both regular and random sampling patterns. The proposed architecture demonstrated superior performance and robustness, significantly outperforming all other models in challenging high-acceleration and random-sampling scenarios. The results confirm that integrating sequential k-space processing via BiRNNs is critical for superior artifact suppression, offering a robust solution for accelerated MRI.

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Publication Details

Journal
Journal of Imaging
Published
2025-12-26
DOI
https://doi.org/10.3390/jimaging12010011
Primary Topic
Advanced MRI Techniques and Applications
Type
article
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article

A Hybrid Vision Transformer-BiRNN Architecture for Direct k-Space to Image Reconstruction in Accelerated MRI

Changheun Oh
Journal of Imaging
Advanced MRI Techniques and Applications
article

A Hybrid Vision Transformer-BiRNN Architecture for Direct k-Space to Image Reconstruction in Accelerated MRI

Changheun Oh
article en

Abstract

Long scan times remain a fundamental challenge in Magnetic Resonance Imaging (MRI). Accelerated MRI, which undersamples k-space, requires robust reconstruction methods to solve the ill-posed inverse problem. Recent methods have shown promise by processing image-domain features to capture global spatial context. However, these approaches are often limited, as they fail to fully leverage the unique, sequential characteristics of the k-space data themselves, which are critical for disentangling aliasing artifacts. This study introduces a novel, hybrid, dual-domain deep learning architecture that combines a ViT-based autoencoder with Bidirectional Recurrent Neural Networks (BiRNNs). The proposed architecture is designed to synergistically process information from both domains: it uses the ViT to learn features from image patches and the BiRNNs to model sequential dependencies directly from k-space data. We conducted a comprehensive comparative analysis against a standard ViT with only an MLP head (Model 1), a ViT autoencoder operating solely in the image domain (Model 2), and a competitive UNet baseline. Evaluations were performed on retrospectively undersampled neuro-MRI data using R = 4 and R = 8 acceleration factors with both regular and random sampling patterns. The proposed architecture demonstrated superior performance and robustness, significantly outperforming all other models in challenging high-acceleration and random-sampling scenarios. The results confirm that integrating sequential k-space processing via BiRNNs is critical for superior artifact suppression, offering a robust solution for accelerated MRI.

Journal of ImagingVol. 12(1)
Hongik University (KR)
Sustainable cities and communities
Openalex Percentile: Top 30%
Advanced MRI Techniques and Applications
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