Cryo‐ <scp>EM</scp> structure of <i>N</i> ‐glycosylated <i>Pomacea canaliculata</i> hemocyanin provides insights into its role in the immune response of gastropods

Hemocyanins are multifunctional soluble proteins found in most mollusks and some arthropods that may turn into a phenoloxidase-like enzyme (PO) associated with innate immune functions. To expand the structural understanding of gastropod hemocyanins and their physiological implications, here we report the single-particle cryogenic electron microscopy (cryo-EM) structure of Pomacea canaliculata snail hemocyanin (PcH) at 4.4 Å resolution along with its intrinsic and proteolytically induced PO activity. PcH shows a Megathura crenulata (giant keyhole limpet) hemocyanin (KLH)-type structure with a cylindrical shape, comprising 20 protomers assembled as di-pentamers of antiparallel asymmetric dimers, organized in a D5 symmetry. Each protomer comprises eight paralogous functional units (FUs) sharing conserved structural features typical of hemocyanins. The achieved map resolution allowed delineation of interaction networks among adjacent subunits across quaternary structure tiers-dimer, pentamer of dimers (decamer), and di-pentamer of dimers (di-decamer). Additionally, we identified six N-glycosylation sites per protomer, totaling 120 glycan trees in the overall structure. Kinetic analysis of intrinsic PO activity using catechol as substrate revealed a Michaelis constant (K<sub>M</sub>) of 45.3 mm and a catalytic rate constant (k<sub>cat</sub>) of 2.87 min<sup>-1</sup>. This specific activity was enhanced by limited proteolysis using digestive and bacterial proteases. Potential protease cleavage sites were identified in silico, mapped onto the PcH model, and their accessibility assessed. Combined with molecular dynamics simulations, these findings suggest a structural basis for the PO induction mechanism. This study expands our knowledge of KLH-type hemocyanins and provides clues into their PO activation, which is triggered by endogenous and/or pathogen-associated proteases. This further underscores the role of molluscan hemocyanins in the innate immune system.

Authors

Institutions

Publication Details

Journal
FEBS Journal
Published
2025-12-26
DOI
https://doi.org/10.1111/febs.70378
Primary Topic
Invertebrate Immune Response Mechanisms
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Cryo‐ EM structure of N ‐glycosylated Pomacea canaliculata hemocyanin provides insights into its role in the immune response of gastropods

Marcos Gragera, Tabata Romina Brola, Horacio Heras, Santiago Ituarte et al.
FEBS Journal
Invertebrate Immune Response Mechanisms
article

Cryo‐ EM structure of N ‐glycosylated Pomacea canaliculata hemocyanin provides insights into its role in the immune response of gastropods

Marcos Gragera, Tabata Romina Brola, Horacio Heras, Santiago Ituarte, Marcos S. Dreon, Guillermo Ignacio Benítez, Ignacio Rafael Chiumiento, Jose‐Maria Carazo, Lisandro Horacio Otero
article en

Abstract

Hemocyanins are multifunctional soluble proteins found in most mollusks and some arthropods that may turn into a phenoloxidase-like enzyme (PO) associated with innate immune functions. To expand the structural understanding of gastropod hemocyanins and their physiological implications, here we report the single-particle cryogenic electron microscopy (cryo-EM) structure of Pomacea canaliculata snail hemocyanin (PcH) at 4.4 Å resolution along with its intrinsic and proteolytically induced PO activity. PcH shows a Megathura crenulata (giant keyhole limpet) hemocyanin (KLH)-type structure with a cylindrical shape, comprising 20 protomers assembled as di-pentamers of antiparallel asymmetric dimers, organized in a D5 symmetry. Each protomer comprises eight paralogous functional units (FUs) sharing conserved structural features typical of hemocyanins. The achieved map resolution allowed delineation of interaction networks among adjacent subunits across quaternary structure tiers-dimer, pentamer of dimers (decamer), and di-pentamer of dimers (di-decamer). Additionally, we identified six N-glycosylation sites per protomer, totaling 120 glycan trees in the overall structure. Kinetic analysis of intrinsic PO activity using catechol as substrate revealed a Michaelis constant (K<sub>M</sub>) of 45.3 mm and a catalytic rate constant (k<sub>cat</sub>) of 2.87 min<sup>-1</sup>. This specific activity was enhanced by limited proteolysis using digestive and bacterial proteases. Potential protease cleavage sites were identified in silico, mapped onto the PcH model, and their accessibility assessed. Combined with molecular dynamics simulations, these findings suggest a structural basis for the PO induction mechanism. This study expands our knowledge of KLH-type hemocyanins and provides clues into their PO activation, which is triggered by endogenous and/or pathogen-associated proteases. This further underscores the role of molluscan hemocyanins in the innate immune system.

FEBS Journal
Universidad Nacional de Río Cuarto (AR), National University of General San Martín (AR), Centro Nacional de Biotecnología (ES), Biochemistry Research Institute of La Plata (AR), Instituto de Biotecnología y Biología Molecular (AR), Universidad Nacional de La Plata (AR)
Life below water
Openalex Percentile: Top 36%
Invertebrate Immune Response Mechanisms
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.