Engineering the Carbon Metabolism of <i>Yarrowia lipolytica</i> to Efficiently Synthesize 2′-Fucosyllactose via a De Novo Pathway

2'-Fucosyllactose (2'-FL), the most abundant oligosaccharide in human milk, exhibits diverse bioactivities and is added to infant formula to simulate breastfeeding. Herein, <i>Yarrowia lipolytica</i> was employed as a microbial chassis for the de novo biosynthesis of 2'-FL. A complete biosynthetic pathway was established via genomic integration, resulting in an initial titer of 2.16 g/L. Systematic metabolic analysis identified the fucosyltransferase (FutC)-catalyzed reaction as the key rate-limiting step, alleviated by promoter engineering upregulating FutC, enhancing 2'-FL production. Additional strategies, including enhancing GDP-fucose supply, knocking out the <i>PFK</i> gene to redirect carbon flux, and strengthening the pentose phosphate pathway (PPP), further boosted production. Fed-batch fermentation with a mixed carbon source led to a titer of 105.88 g/L and a productivity of 0.98 g/L/h in strain YL16-6, representing the highest reported 2'-FL production in a plasmid- and antibiotic-free microbial system to date. This work demonstrates the potential of <i>Y. lipolytica</i> as a robust, scalable cell factory for the sustainable and antibiotic-free industrial production of 2'-FL.

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Journal
Journal of Agricultural and Food Chemistry
Published
2025-12-27
DOI
https://doi.org/10.1021/acs.jafc.5c05541
Primary Topic
Infant Nutrition and Health
Type
article
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article

Engineering the Carbon Metabolism of Yarrowia lipolytica to Efficiently Synthesize 2′-Fucosyllactose via a De Novo Pathway

L. Zhang, Zhen Guo, Jingyi Wang, Miao Zhang et al.
Journal of Agricultural and Food Chemistry
Infant Nutrition and Health
article

Engineering the Carbon Metabolism of Yarrowia lipolytica to Efficiently Synthesize 2′-Fucosyllactose via a De Novo Pathway

L. Zhang, Zhen Guo, Jingyi Wang, Miao Zhang, Zhenghua Gu, Xinhua Zhang, Yiran Zhang, Zilong Wang, Xingyu Zhu
article en

Abstract

2'-Fucosyllactose (2'-FL), the most abundant oligosaccharide in human milk, exhibits diverse bioactivities and is added to infant formula to simulate breastfeeding. Herein, <i>Yarrowia lipolytica</i> was employed as a microbial chassis for the de novo biosynthesis of 2'-FL. A complete biosynthetic pathway was established via genomic integration, resulting in an initial titer of 2.16 g/L. Systematic metabolic analysis identified the fucosyltransferase (FutC)-catalyzed reaction as the key rate-limiting step, alleviated by promoter engineering upregulating FutC, enhancing 2'-FL production. Additional strategies, including enhancing GDP-fucose supply, knocking out the <i>PFK</i> gene to redirect carbon flux, and strengthening the pentose phosphate pathway (PPP), further boosted production. Fed-batch fermentation with a mixed carbon source led to a titer of 105.88 g/L and a productivity of 0.98 g/L/h in strain YL16-6, representing the highest reported 2'-FL production in a plasmid- and antibiotic-free microbial system to date. This work demonstrates the potential of <i>Y. lipolytica</i> as a robust, scalable cell factory for the sustainable and antibiotic-free industrial production of 2'-FL.

Journal of Agricultural and Food ChemistryVol. 74(1)
Jiangnan University (CN), Minjiang University (CN), Institute of Food Science & Technology (GB), Fujian Institute of Oceanography (CN)
Industry, innovation and infrastructure
Openalex Percentile: Top 35%
Infant Nutrition and Health
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