The differential subcellular localization of soybean transcripts, an additional regulatory mechanism of gene activity

Our findings reveal the strong diversity in the spatial distribution of transcripts in and between differentiated plant cells. It suggests that transcript localization serves as an additional regulatory layer beyond transcriptional control. By modulating nuclear export and cytoplasmic positioning, plant cells may fine-tune translational efficiency and gene function. This study underscores the importance of incorporating spatial information into transcriptomic analyses and provides new insights into the regulatory architecture of plant RNA biology.

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Publication Details

Journal
Genome biology
Published
2025-12-27
DOI
https://doi.org/10.1186/s13059-025-03920-z
Primary Topic
Nuclear Structure and Function
Type
article
Field-Weighted Citation Impact
0.00
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article

The differential subcellular localization of soybean transcripts, an additional regulatory mechanism of gene activity

Marc Libault, Erik J. Amézquita, Sandra Thibivilliers, Sutton Tennant et al.
Genome biology
Nuclear Structure and Function
article

The differential subcellular localization of soybean transcripts, an additional regulatory mechanism of gene activity

Marc Libault, Erik J. Amézquita, Sandra Thibivilliers, Sutton Tennant, Jasper Kläver, Sai Subhash Mahamkali Venkata Subramanyam, Samik Bhattacharya, Benjamin Smith, Yaohua Li, Sergio Alan Cervantes-Pérez
article en

Abstract

Our findings reveal the strong diversity in the spatial distribution of transcripts in and between differentiated plant cells. It suggests that transcript localization serves as an additional regulatory layer beyond transcriptional control. By modulating nuclear export and cytoplasmic positioning, plant cells may fine-tune translational efficiency and gene function. This study underscores the importance of incorporating spatial information into transcriptomic analyses and provides new insights into the regulatory architecture of plant RNA biology.

Genome biologyVol. 27(1)
University of Nebraska–Lincoln (US), University of Arizona (US), Sanol (Germany) (DE), UCB Pharma (Germany) (DE), University of Missouri (US), Columbia College - Missouri (US), University of California, Berkeley (US)
Zero hunger
Openalex Percentile: Top 36%
Nuclear Structure and Function
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