New Sulfonate-Semicarbazone Hybrid Molecules: Synthesis, Theoretical Evaluations, Molecular Simulations, and Butyrylcholinesterase Inhibition Activity

In the present work, 18 novel semicarbazone-sulfonate hybrids were synthesized to evaluate their potential as butyrylcholinesterase (BChE) inhibitors. Among all compounds, 4-[(<i>E</i>)-(2-carbamoylhydrazinylidene)-methyl]-phenyl 2-(trifluoromethoxy)-benzene-1-sulfonate (<b>12</b>), 4-[(<i>E</i>)-(2-carbamoylhydrazinylidene)-methyl]-phenyl naphthalene-1-sulfonate (<b>17</b>), and 4-[(<i>E</i>)-(2-carbamoylhydrazinylidene)-methyl]-phenyl naphthalene-2-sulfonate (<b>18</b>) exhibited the most potent BChE inhibition, with IC<sub>50</sub> values of 61.88, 77.02, and 93.67 μM, respectively, outperforming the reference drug pyridostigmine bromide (IC<sub>50</sub>: 130.04 μM). As shown by molecular docking studies, numerous interactions, including hydrogen bonds, π-π stacking, π-sulfur contacts, and halogen bonds, supported the high binding of compounds' affinities to the BChE active site. Also, this study employed molecular dynamics (MD) simulations to assess the inhibitory potential of compounds <b>12</b>, <b>17</b>, and <b>18</b> against BChE. All ligands retained structural integrity during simulations. Compound <b>17</b> exhibited the highest conformational stability (minimal RMSD values) and formed robust interactions with critical binding site residues. Additionally, compound <b>18</b> demonstrated superior hydrogen bonding capacity, while compound <b>17</b> achieved the strongest binding affinity. Furthermore, <i>in silico</i> ADME predictions for the most active molecules showed good pharmacokinetic profiles and drug-likeness. Consequently, the results suggested that semicarbazone-sulfonate hybrid compounds <b>12</b>, <b>17</b>, and <b>18</b> were promising potential multifunctional agents targeting cholinergic dysfunction in Alzheimer's disease (AD).

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Journal
ACS Omega
Published
2025-12-26
DOI
https://doi.org/10.1021/acsomega.5c09763
Primary Topic
Cholinesterase and Neurodegenerative Diseases
Type
article
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article

New Sulfonate-Semicarbazone Hybrid Molecules: Synthesis, Theoretical Evaluations, Molecular Simulations, and Butyrylcholinesterase Inhibition Activity

Ayşegül KARAKÜÇÜK-İYİDOĞAN, Emel Ekinci, Oruc-Emre Emine Elcin, Bedriye Seda KURŞUN-AKTAR et al.
ACS Omega
Cholinesterase and Neurodegenerative Diseases
article

New Sulfonate-Semicarbazone Hybrid Molecules: Synthesis, Theoretical Evaluations, Molecular Simulations, and Butyrylcholinesterase Inhibition Activity

Ayşegül KARAKÜÇÜK-İYİDOĞAN, Emel Ekinci, Oruc-Emre Emine Elcin, Bedriye Seda KURŞUN-AKTAR, Zafer Bulut, Adem Şevki, Volkan Eyüpoğlu
article en

Abstract

In the present work, 18 novel semicarbazone-sulfonate hybrids were synthesized to evaluate their potential as butyrylcholinesterase (BChE) inhibitors. Among all compounds, 4-[(<i>E</i>)-(2-carbamoylhydrazinylidene)-methyl]-phenyl 2-(trifluoromethoxy)-benzene-1-sulfonate (<b>12</b>), 4-[(<i>E</i>)-(2-carbamoylhydrazinylidene)-methyl]-phenyl naphthalene-1-sulfonate (<b>17</b>), and 4-[(<i>E</i>)-(2-carbamoylhydrazinylidene)-methyl]-phenyl naphthalene-2-sulfonate (<b>18</b>) exhibited the most potent BChE inhibition, with IC<sub>50</sub> values of 61.88, 77.02, and 93.67 μM, respectively, outperforming the reference drug pyridostigmine bromide (IC<sub>50</sub>: 130.04 μM). As shown by molecular docking studies, numerous interactions, including hydrogen bonds, π-π stacking, π-sulfur contacts, and halogen bonds, supported the high binding of compounds' affinities to the BChE active site. Also, this study employed molecular dynamics (MD) simulations to assess the inhibitory potential of compounds <b>12</b>, <b>17</b>, and <b>18</b> against BChE. All ligands retained structural integrity during simulations. Compound <b>17</b> exhibited the highest conformational stability (minimal RMSD values) and formed robust interactions with critical binding site residues. Additionally, compound <b>18</b> demonstrated superior hydrogen bonding capacity, while compound <b>17</b> achieved the strongest binding affinity. Furthermore, <i>in silico</i> ADME predictions for the most active molecules showed good pharmacokinetic profiles and drug-likeness. Consequently, the results suggested that semicarbazone-sulfonate hybrid compounds <b>12</b>, <b>17</b>, and <b>18</b> were promising potential multifunctional agents targeting cholinergic dysfunction in Alzheimer's disease (AD).

ACS OmegaVol. 11(1)
Çankırı Karatekin University (TR), Malatya Turgut Özal Üniversitesi (TR), Office of Basic Energy Sciences (US), Gaziantep University (TR), Turgut Özal University (TR)
Clean water and sanitation
Openalex Percentile: Top 30%
Cholinesterase and Neurodegenerative Diseases
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